Trematomus bernacchii (emerald rockcod): 117480967
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Entry
117480967 CDS
T09643
Symbol
rapgef4
Name
(RefSeq) rap guanine nucleotide exchange factor 4
KO
K04351
Rap guanine nucleotide exchange factor 4
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04081
Hormone signaling
tben04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
117480967 (rapgef4)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
117480967 (rapgef4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117480967 (rapgef4)
Membrane trafficking [BR:
tben04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
117480967 (rapgef4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
cNMP_binding
DEP
RasGEF_N
RA_2
VTC
RA
Mis12
Motif
Other DBs
NCBI-GeneID:
117480967
NCBI-ProteinID:
XP_033984275
LinkDB
All DBs
Position
Unknown
AA seq
1023 aa
AA seq
DB search
MVAAHTSSHSSESAEWIICLDKRPAERSGEDVDIILARLKNVKAFERFRPSLLQQICLCG
FYVCLEKGITLYRQGDIGTSWYAVISGSLDVRVSETSSYQDAVPICTLGTGTAFGESILD
NTPRHATIVTREFSELLRIEQREFRSLWEKYHQCMAGLLAPPYGVMESGCSGDRMPDKEN
ISNNSFVPVSKHQTKKSFIESPAKSHLRCLSQVPSEKILRAGKILRNAILSRAPHMIRDR
KYHLKTYRQCCVGTELVDWQMQQSSCIHSRIQAVGMWQVLLEEGVLNHVDQELTFQDKYL
FYRFLDDEQEDAPLPDEEERKESQEELQDTLLLLSQIGPDAHMRMILRKHPSERAADDLE
IIYEELLHIKALSHLSTTVKRELAGVLIFESHAKAGTVLFSQGEEGTSWYIILKGSVNVV
IYGKGVVCTLHEGDDFGKLALVNDAPRAASIVLREDNCHFLRVDKEDFNRILRDVEANTV
RLKEHGQDVLVLEKSHGRTSSHGASSSHYKYKVMSGTPEKILEHLLEMIRLDSQFSESDA
ALEDFALMHCVFIPNTQLCPVLLAHYHAQALQGSDQEKLDYTLNNKRRVIRLVMQWAAVH
GDQLQQEEVPVAFLEEFLVAVSNDAESIPALRDQLAELERRVKRHTEDASVSQKKHKVLL
RQFSMGDEKLQKRQPIKSIDEILLKVYCCDHTYTTIRVPVAASVREVIGAVADKLGSAED
LLLVSLSSAGEKVIFKPNDVSVFSTLSVNGRLFVCRRDQLDSLTPLPEQDGSSTALLAGF
ELMSSKDVAYHMTSYDWELFHCVHELELIYHTFGRQNVKKTTVNLDLFLRRFNEIQFWVI
TEVCLCSQLSKRVQLLKKFIKIAAHCKEYRNLNAFFAIIMGLSNPAVCRLSQTWEKLPSK
FKKFYGEFENFMDPSRNHRAYRLTVSKLEPPIIPFMPLLIKDMTFTHEGNKTFIDCLVNF
EKMRMIANTVKIVRYCRSQPFSPDSPLASKSHPEVRTYVRQLNVIDNQRTLTQLSHGLEP
RRS
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atggtagcagcacacacttcttcacattcgtcggaatctgccgagtggattatttgtctg
gataaaaggccagcagagcgctctggggaagatgttgacataattctggctcgcctgaaa
aatgtgaaggccttcgagagatttcgccccagtttgttgcagcagatttgcctgtgtgga
ttctatgtgtgcttggagaaaggcatcaccttgtatcgccaaggagacattggcaccagc
tggtatgcggtcatctctggttcactggatgtcagagtttcagagacatcaagttatcag
gatgctgttcctatatgcacgctgggcaccggcacagcatttggagagtccatcctggat
aacaccccccggcatgccaccattgtcacgagggaattcagtgagctcctacgcatcgag
cagagggagttcaggtctctgtgggagaaatatcatcagtgcatggctggactgctcgcc
ccaccatatggtgtgatggaaagcggatgtagtggtgacaggatgccggacaaagagaac
ataagcaacaactcatttgttccagtctccaaacatcagactaagaagtcattcattgaa
agtccagccaaatcccaccttagatgcttatcccaggttccctcagagaagatcctgcgg
gcggggaagattctccgtaacgccatcctctccagggcgcctcacatgatcagagacagg
aagtaccatctgaagacgtacaggcagtgttgcgtggggacggagttggttgactggcaa
atgcagcagagctcatgcatccactctcgtattcaggctgtgggcatgtggcaggtgctg
ctggaagaaggtgttctcaaccatgtggaccaagagctgaccttccaggacaagtacctc
ttctaccgcttcctggatgacgagcaggaagacgctcctctacccgacgaggaggagagg
aaggagagccaagaggagctgcaggacacgctgctcctcctctcgcagattggaccagac
gcccacatgaggatgattctgaggaaacatccgtctgaaagagcggcagatgatttggag
atcatctatgaagagctgctccatataaaggcattatctcacctatccaccactgtaaag
agagagctggcaggagtgctgatctttgagtctcatgcgaaggcaggaacagtgttgttc
agtcagggggaggagggcacatcatggtacattattttgaagggctcagtcaacgttgtc
atctatgggaaaggtgttgtttgcactcttcacgagggagacgactttgggaagctcgct
ctggttaatgacgccccccgcgctgcctccattgtcctgcgagaggacaactgtcacttc
ctgagagtcgacaaggaagacttcaacaggattttgagggatgtggaggccaacacggtg
cgtctgaaggagcacggtcaggatgttctggtgttagagaagagtcacggtcgcacctcc
agccacggggcctcgtcctcccattacaaatacaaggtgatgtcggggactccggagaag
attttggagcacctcctcgagatgatacgattggattcacaattctcagagtcagacgct
gccttagaggactttgcgctcatgcactgtgtcttcatcccaaacacgcaactatgtccg
gtgttgttggcacactaccacgcgcaggccttgcagggctctgatcaggagaagctggac
tacacactgaacaacaagcgcagggtgatccgcctggtgatgcagtgggcggctgtacat
ggagaccagctgcagcaggaggaggtccctgtggccttcctggaggagtttctcgtggca
gtatctaatgatgccgagtcgattccagccctcagggatcaactagcagaactggagaga
agggtaaagcgacacactgaagatgccagtgtctctcagaaaaagcacaaagtcttactg
cggcagttcagtatgggagatgagaagcttcagaagcgccagcccatcaagagtatcgat
gaaattctgctcaaagtctactgctgtgaccacacctacacgactatccgtgtccctgtg
gccgcctcagtcagggaggtcatcggtgccgtggccgacaagctggggtcagcggaggac
ctgctgctggtcagcctcagttctgcaggagagaaagtcatcttcaagcccaatgatgtt
tcagtgttctccacgctcagcgtaaacggacggctgtttgtgtgccggagggatcagttg
gattctttgacccctctacctgaacaggatggttcctctacagcgctgttggctggtttt
gagttaatgagctctaaggatgtagcttaccacatgacttcctatgattgggagcttttt
cactgtgtccacgagcttgaactcatctaccacacgtttgggaggcaaaacgtcaagaag
accacggtgaacctggacctgttcctgaggaggtttaatgagattcagttttgggtgatc
acagaggtgtgtctgtgttctcagctcagcaagagggtgcagcttctcaagaagttcatc
aagattgctgcccactgcaaggaatacagaaacctgaacgccttctttgctatcattatg
ggactgagtaacccagcagtgtgcagattgagtcagacctgggagaaactcccaagcaaa
ttcaagaagttttacggggaatttgaaaactttatggacccgtccaggaaccaccgggcg
taccgactgacagtttccaaactggagcctcccatcattcccttcatgccgctgctgatc
aaagacatgacatttactcatgagggcaacaagacatttatcgactgtttggtcaatttt
gagaaaatgcggatgatcgctaacacggtgaagatagtgagatactgccggagccaaccg
ttcagcccagattcacctctggccagcaagagccacccagaagttcgcacttacgtacgt
cagctcaacgtgatcgacaaccaaaggacgctaactcagctctctcatggacttgagcct
cgcaggtcttga
DBGET
integrated database retrieval system
