Trematomus bernacchii (emerald rockcod): 117481096
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Entry
117481096 CDS
T09643
Name
(RefSeq) toll-like receptor 7 isoform X1
KO
K10170
toll-like receptor 8
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04142
Lysosome biogenesis
tben04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
117481096
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
117481096
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
tben04054
]
117481096
04090 CD molecules [BR:
tben04090
]
117481096
Pattern recognition receptors [BR:
tben04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
117481096
CD molecules [BR:
tben04090
]
Proteins
117481096
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_14
TIR
TIR_2
LRR_Zer-1
LRR_LRWD1
LRR_6
LRR_5
LRR_12
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
117481096
NCBI-ProteinID:
XP_033984505
LinkDB
All DBs
Position
Unknown
AA seq
1026 aa
AA seq
DB search
MTVACWMHLLLSYLCCQYKIQPAESKPEWMTLQFSCDVTADNNSNVLFDCGGRGLTEVPD
GITNNATHLILSDNSILDIWNDSLSNLLNLTQLDLSRANIDKPVIINVNAFKNLTKLREL
KLSGTGLKEIPANLPPSLEIIELNSNNIMLLNGKFDCLANIKQLVLAKNCYYSNPCKTSV
NMENRLEVMSKLKHLDLSHNNLTEVPKGFPPSLGVLKLDNNRINHIPGFLMLPNVTVLKL
EGNCPRCENAPHPCVTCPNKSLDIDPNAFQYLTQLKILNMGGNSLTHLDPSWFKSLNKLK
QLFLSFNFLFKAITEEATFLRHLPKLERLDISFNYGIKLYPTQLNLSEEFSHLKSLKVFH
LQGLVFQSIGPETLRPLYQLKNLSTMNLGTNFIIHSDSTVFHKFHNLKVMYLAENKLFPT
PDRNRLDSSYGGYNQRSELSIPPLTIPLPDDYVYEHVKSLVKEDCFNSGRVLSLSSNNMF
FISPKQFVGYEDIACLNLSKNGFSAAPNGTEFSPLQNLTYLDLSFNRIDLAYSGAFSELK
KLQVLDLSHNEHYFEAYGVTLNLNFTQNLPALRVLNMSYNSISILTTKQMYSRSLTELQF
TDNLLGTLWKETDLSYKSIFTNLINLTILDISSNHISTIPDYVYEYLPRNLTILRISHNL
LTDFKWDRLKFFHQLQILDLSFNSLPNVTLINSNVTRTLTFLDLSHNYIFHLDSGFVNGV
KQLTALSLSYNKLTIINQSTFPSRSESQLHTLFLQGNPFQCTCDALDFIIWMENSNVKIP
RLITDVTCDTPADQKDNVLIKFDIRECIDDSQAFLIYILTSSLIIVFMFVATVSHFFYWD
ASYVMHYMKAKIKGYRAFNSPGAIYDVFVTYDTTDPHVTEWVMRNLRVKLEEEGEKHLPL
CLEERDWTPGAPLVNNLTHSIQYSRKTLFVLTEGYVKTGVFKLAMYLAHQRLLDENLDVI
VLLMLEPVLQHSHFLRLRRRLCEKSVVEWPRTAAAEPWFWQNLRNVVRVDNKLMYNKKYS
KYFTSK
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgacggtcgcatgttggatgcacttgctgctgtcctatctgtgttgccaatataagatc
cagcccgctgaaagcaaacctgagtggatgacactgcagttctcttgtgatgtcacagcc
gacaataactctaatgtcctatttgactgtggaggccgtggactgacagaagtacctgat
gggataaccaacaatgcaactcatctcatcttatcagacaattccattctggatatttgg
aatgactcattatccaacttgctgaatctgacccaacttgatctcagcagagcaaacatt
gacaaaccggtgatcatcaatgtgaatgctttcaaaaatctgacaaaactgcgtgaactg
aaactgagtggcactggtctgaaggaaattcctgctaatcttcctcccagtttggaaatc
attgagctgaacagtaacaacattatgttgttgaatgggaaatttgattgcttagctaat
attaaacagttagtgttagccaaaaactgctactacagcaatccttgtaagacatctgtt
aacatggaaaaccgtttggaagtaatgagcaaactgaagcatttggacttgtctcataac
aacttaactgaagttcccaaaggtttcccaccgtcattaggcgtgttgaagctggataat
aacagaataaatcacatccctggttttcttatgcttccaaatgtaacagtcctgaaatta
gaagggaactgtccaagatgtgaaaacgctccacatccctgtgtcacctgtccaaacaag
tctcttgatattgatcctaatgcatttcaatatctaacccagctgaagatactgaatatg
ggaggaaactcactgacacacctggatccttcctggtttaagagtctgaacaaacttaaa
caattgttcctgtcttttaacttcttatttaaggcaattactgaggaggcaacatttctg
agacatcttcctaagctagagagacttgatatctctttcaactatggtatcaagttatac
cctacacaattaaatctctcagaagagttttcacatcttaagtcccttaaagtttttcat
ttgcagggattggtcttccagagtattggaccggagacgctcagacctctgtaccaactc
aaaaatctctctaccatgaacttagggacaaactttattatccactccgattccactgta
tttcacaaattccacaacctgaaagtgatgtacctcgcagaaaacaagctttttcccact
ccagatagaaatcggcttgattcatcatacggtggttacaatcagaggtccgaactttct
attcctccgctcacaattcctcttccggatgattatgtttatgagcatgtgaagagcctt
gtcaaggaagactgttttaactctggacgagtgctatctctcagctcaaataatatgttc
ttcatttctccaaagcagtttgttggctatgaagacattgcatgtcttaacctctcaaaa
aatggattttcagcagcacctaatggtacagagttttcaccactgcagaatctaacatac
ctggacctgtcattcaataggattgatttggcctatagcggagccttcagtgaactaaag
aaactacaagtgctagaccttagtcacaatgaacactactttgaagcgtacggggtaaca
cttaatttaaatttcacacaaaatcttcctgctctgagggtgctgaatatgagttataac
tccatttccattttaaccaccaaacagatgtacagccgttcattaacagaacttcagttt
acagataatcttctggggaccctttggaaagaaacagatctctcatataagagcattttt
actaatcttattaatttgacaattttagacatatccagcaaccacatttcaacgattcca
gactatgtttatgaatatttgccgcgtaacctcacaatactacgcataagtcacaacttg
cttactgattttaaatgggacagactcaagtttttccatcaacttcagattttggacctg
agcttcaattctctacctaatgtgacacttataaactcaaacgtaacccgcactttgact
ttccttgacctgagtcataattacattttccacttggacagtggatttgtaaatggtgta
aaacagcttacagctcttagcctaagctacaacaaactgactattatcaatcaatccacc
ttcccatcgagatctgaatctcagcttcacactttgttcttgcaaggcaacccgttccaa
tgtacctgcgatgcacttgatttcattatttggatggaaaacagtaatgtaaagattcct
agactaatcactgatgtgacatgtgacacaccagcagatcaaaaagataacgttctgatc
aaatttgacattagggagtgtatagatgacagtcaggcgttcttgatttacatcctcaca
agttcattaattattgtttttatgtttgtggcaacagtttcccactttttttactgggat
gcttcctacgtgatgcactatatgaaagctaagataaaaggatacagagcctttaactca
ccaggcgccatttatgatgtctttgtgacttacgacaccacagatccacatgtcactgaa
tgggtgatgaggaatctgcgagtgaaactggaagaggaaggagagaagcatcttcctctg
tgtcttgaggagagagattggacccccggcgcccccctggtaaataacctcactcacagc
atccagtacagtcgcaagaccctgttcgtcttgacggagggctacgttaagaccggggtt
ttcaaactggcaatgtatctggcccaccaaagactgcttgatgagaacctggatgtgatt
gtgctgctgatgctggagcccgtcctgcagcactctcactttctgcgcctgaggaggagg
ctgtgtgagaaaagtgttgtggagtggccgagaacagctgctgctgagccctggttttgg
caaaacctgaggaatgtggtcagagtggacaacaagttgatgtacaacaagaaatattca
aaatacttcaccagcaagtga
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integrated database retrieval system
