Trematomus bernacchii (emerald rockcod): 117481733
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Entry
117481733 CDS
T09643
Symbol
traf5
Name
(RefSeq) TNF receptor-associated factor 5 isoform X1
KO
K09849
TNF receptor-associated factor 5
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04217
Necroptosis
tben04621
NOD-like receptor signaling pathway
tben05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
117481733 (traf5)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117481733 (traf5)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117481733 (traf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117481733 (traf5)
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
117481733 (traf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4
TRAF3_RING
zf-RING_UBOX
zf-C3HC4_2
zf-RING_2
zf-C3HC4_4
Sina_ZnF
Vps54_N
zf-TRAF_2
APG6_N
Motif
Other DBs
NCBI-GeneID:
117481733
NCBI-ProteinID:
XP_033985484
LinkDB
All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MCSRDFTDISETEVVLCRLMATADTKLGGSEESSLDSVRRSEESKLSSWESELPSLQHSL
KFVLELKEEFVCPICRGVVLNPQQNSCGHIFCLLCLQHLLESSSPSSPVCPVDAAVITPS
EVFQDNCCKREIACLDVYCTNSPECTSVVTLRHLQEHLRSCQFETLQCCNPGCRAALPRR
ELQEHLSVTCPHRLEPCTHCQQPQRLSLLQDHVQSSCPQVEVDCPYSCSLKVPRHMLTEH
RDSCPELHVDCSYQRLGCSVQGKRGRVKLHEDSAVSQHMLLVLRSNTHLEQQVEVLQETA
LLRHNELQTDSLLLAGLQKKIRPLLQHNSSQEHIVSAAQRTLSRQEDVLSTLQLDVQQIS
RGLGSGLQELEDLRKSLDAVIQEVSAAEALREHLGTLEENMKRHSGLLDIHATQLRTHRE
HLQELEATSNDGKLIWKIEDFRNKREAEVKGHPPCLSSVPFHTGPCGYKMASKVYLNGDG
EGRGTHLSLYVVLMVGDFDALLPWPFRQTVALSVLDQSGAGNHQSLSFKPDLTSKSFQRP
TDESAGNVAVGFSCFIPLIKLEKPQNAAYVKEDTMFVKVKVDMAGLEQL
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgtgttcaagggacttcactgatatttcagaaactgaggttgttctctgcagactcatg
gcgacagcagacacaaagctgggaggatccgaggagtccagtttggattcagtgaggcgg
tcggaggagtcgaagctgagctcctgggagtcggagctgccctccctccagcactccctg
aagtttgtgctggagctgaaggaggagtttgtgtgtccgatctgcagaggagtggtcctg
aacccccagcagaactcctgcggacacatcttctgcctcctctgcctccaacacctgcta
gagagttcatctccgtccagcccagtttgtcccgtggacgcagctgtgatcacaccatct
gaggttttccaggataactgctgcaaaagagaaatcgcctgtttagacgtgtactgcacc
aactccccagaatgcacctctgtcgtcacattacgccacctgcaggagcacctgaggtcg
tgtcagtttgagacgctgcaatgctgcaacccaggctgcagggcggcgctgccgaggaga
gagctgcaggaacacctgagcgtcacctgtcctcaccgcctggagccctgcacacactgc
cagcagccgcagagactcagcctcctccaggatcatgtgcagagctcctgtcctcaggtg
gaggtggactgtccctacagctgctccctgaaggttcccagacacatgctgacggagcac
agagactcgtgtcctgagctccacgttgactgctcctatcagaggctgggctgctcggtg
cagggtaagagaggcagagtgaagctgcacgaagactctgctgtcagccagcacatgctg
ctcgtcctgaggagcaacacacacctggagcaacaggtggaggttctccaggagacggcg
ctgctgaggcacaacgagctgcagacggacagcttgctgctcgctggcctgcagaagaaa
atcagaccgctgctgcaacacaacagcagccaggaacacatcgtctctgcagcgcagagg
acgctgagcaggcaggaggatgtcctctccacgctgcagctggacgtgcagcagatatct
cggggtctgggttctggtctgcaggagctggaggacctcaggaagtctctggatgctgtg
attcaggaagtgtcggcagccgaggccctcagagaacacctggggacgttggaggagaat
atgaagcgtcactctggcctcctggatatccacgccactcagctcagaacccacagggag
cacctgcaggagctcgaagccacttcaaacgacggaaaactcatctggaagatcgaggac
ttcaggaacaagagggaagccgaggtcaaaggtcatccgccctgcctgagcagcgtgccg
ttccacaccggaccgtgcggatacaaaatggcctccaaggtctatctgaacggggacggg
gaaggaagagggactcacctttctctttatgtggtcctgatggtgggagactttgacgct
ctgctgccgtggcctttcagacaaaccgtggctctgtcggttttggatcaaagcggtgcc
ggaaaccaccaaagtctgagcttcaaacccgacctgacgtccaaaagcttccagcgaccg
acagacgagtcggccggtaacgtcgctgtaggattctcgtgcttcattccactcatcaag
ctggaaaagcctcaaaatgctgcgtatgtcaaagaggacacgatgtttgttaaagtgaag
gtggacatggcgggtttagagcagctgtag
DBGET
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