Trematomus bernacchii (emerald rockcod): 117482835
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Entry
117482835 CDS
T09643
Name
(RefSeq) major histocompatibility complex class I-related gene protein-like
KO
K06751
MHC class I antigen
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04144
Endocytosis
tben04145
Phagosome
tben04218
Cellular senescence
tben04514
Cell adhesion molecules
tben05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117482835
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117482835
04145 Phagosome
117482835
09143 Cell growth and death
04218 Cellular senescence
117482835
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117482835
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tben04147
]
117482835
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tben00537
]
117482835
Exosome [BR:
tben04147
]
Exosomal proteins
Proteins found in most exosomes
117482835
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tben00537
]
Antigens
117482835
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MHC_I
C1-set
MHC_I_3
MHC_II_alpha
Ig_3
Motif
Other DBs
NCBI-GeneID:
117482835
NCBI-ProteinID:
XP_033986944
LinkDB
All DBs
Position
Unknown
AA seq
359 aa
AA seq
DB search
MKMLLFLLLLGIVGPHCTSARTHSLKYFDTASSGVPNLPEFVSVGLVDEVQITHYDSNTK
RYEPKQDWMNNITAEDPQYWERNTQISLSNQQVFKNNIETAKQRFNQTGGSHIVQRMIGC
DWDDETGEVKGYLHHGFDGEDFLILDLETESWIAPRREAVLTKQRLDKDKALMANLKNYF
TQVCPEYLKKFMNNGRSFLMRTEIPSVSLLQKSPSSPVSCHATGFYPDRALMFWTRDGEE
IYDNVDHGEILPNHDGSFQMSVDLNVSSIPAEHWDKYRCVFQLSGVAEDHVIVLDSAVIR
TNRARYPKLATLLLKHGWLLSSSLSSSLGLDSWFTGRGTPIETTSASSELTERLNQPAQ
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgttgctgtttctgcttctcctgggaatagtaggcccacactgcacatctgca
cggactcactctctgaagtatttcgacactgcgtcctctggagtcccaaacttaccagag
tttgttagtgttgggttggttgatgaggttcagataactcactacgacagcaacaccaag
agatacgaacccaaacaggactggatgaacaacatcacagcagaggatcctcagtactgg
gagaggaacactcagatctctctgagtaaccagcaggtcttcaaaaacaacattgaaact
gcaaagcagcgcttcaaccaaactggagggtcgcacattgtccagaggatgataggctgt
gattgggatgatgagactggtgaggtcaaaggttatctacaccatggttttgatggagaa
gacttcctgatactggacctggagacagagtcatggatcgctccaagacgagaggctgtc
ctcaccaaacagaggttggataaggacaaagctttgatggcaaacctcaagaactacttc
acccaggtctgtcctgagtatctgaagaagtttatgaacaatgggaggagcttcctgatg
agaacagagatcccctcagtgtctctgctccagaagtccccctcctctccagtcagctgc
cacgctacaggtttctacccggacagagccctcatgttctggaccagagacggagaggag
atttacgacaacgtggaccacggagagatcctgcccaaccacgacggatccttccagatg
agcgtggacctgaacgtctcctcaatccccgctgaacactgggacaagtaccgatgtgtg
ttccagctctctggggtggcggaggaccacgtcatcgtactggactcagctgtgatcagg
accaacagagccaggtacccaaagttggcaaccctgttgctgaaacatgggtggctgctc
tcttcatcgctctcctcgtcgctgggattggattcctggtttacaggaagaggaacgcca
atagaaacaacttccgccagctctgagctcactgagagactgaaccagccggcacagtga
DBGET
integrated database retrieval system
