Trematomus bernacchii (emerald rockcod): 117483143
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Entry
117483143 CDS
T09643
Symbol
lemd3
Name
(RefSeq) inner nuclear membrane protein Man1
KO
K19410
inner nuclear membrane protein Man1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
117483143 (lemd3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tben04812
]
117483143 (lemd3)
Cytoskeleton proteins [BR:
tben04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
117483143 (lemd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MSC
LEM
RBM39linker
Motif
Other DBs
NCBI-GeneID:
117483143
NCBI-ProteinID:
XP_033987227
LinkDB
All DBs
Position
Unknown
AA seq
858 aa
AA seq
DB search
MASTQLTDEELFSELKHFGFTPGPVTENTRPVYLKKLKKLRDEQQQRGSRAGKTRSTGAI
HSPSGGGNTAGSRPASHDVTHLSSSRRPGRKSSVLGFSSDESDAETPVKRKGLNHSSRAD
GSPGFPQHPKIRPTTPSVANKSQYGATLNSTNSSPGPGRQRGVSLGWGVRARSSPEAEGK
DYDESGDEDDYEGEIEKHSRSLNGCGASHLNTSKLAGDYSDSDEEEVRGPGVGDQQQERL
VPNVRRSHPKAEFAFHVVGRGSQTGGAARQVNPPEGLNMVGNRREEGEGGEGKRRDSDTP
GGLRSHTVSPRKTIYVSLAENHGGEAGKNNHVDGEDGAYRSSRFAIGLRPRFSNYSSLSQ
TYRSNHSNHTAPNHSYSQAVLKQKLSVPEDELLQQFKREEVASSGSFSAHYLSMFLLTAA
CLFFLLLGLMYLRMRGSGSSEVDEVIKSHPFGSKFDELYNKTEKDLILKLLLNLHDHLAQ
VAGQYDCGDQQHLNRSLSMAEASTYLRSQNQDFDGFIETSLEWIIKTGQDVGIRLTGQVA
DEPLTDVSEISRLESSHPKMPFTCRFRRAFLTVISRVSLIAVVVGCVWSVVCYMKFRWRR
EKEDTRQMYDMVERIIDVLRSHSEACQENQDLQPYLPIPHVRDSLVQPQDRKKMKKIWER
AEKFLAANESRIRKETQRIGGADFLVWRWIQPSLSCDKTSSMNSKVWQGKAFPLDRRNSP
PNSLTPCLKIRNMFDPIMEVGENWDLAIHEAILEKCNDNDGIVHIAVDKNSREGCVYVKC
LSAEHSGRAFKALHGSWFDGKLVTVKYLRLDRYHQRFPQAQGSSTPLKASSPPLSTTGTM
NTVPRLQHRGAGNSSGFS
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaacgcagttaacggatgaggagcttttctccgaattaaagcactttggtttc
actccaggaccggttaccgaaaacactcggccggtgtatctgaagaaattgaagaagctt
cgcgacgagcaacagcagcggggctccagagccggtaaaacccgtagcaccggggccatt
cacagccccagcggcggaggcaacacggcgggatccaggccagccagccatgacgtcacg
cacctgagctccagcaggagaccgggcaggaagtcctccgtcctgggcttcagctccgac
gagtctgacgctgaaactccagtcaaaagaaaaggcctcaatcacagcagtagggcagac
gggagccccgggttcccacaacatccgaagataaggccgacaacaccgagtgtagctaac
aagagtcagtatggcgctacgctaaatagcaccaattcttccccgggtccgggcagacag
aggggagtctcgctgggctggggggtccgggccagatcaagccctgaggcggaagggaag
gattacgacgaatcgggggacgaggatgattatgagggggaaatagagaaacactctcgc
tctttaaatggttgtggggcgtctcacttaaacactagcaagctagctggggattactca
gactcggacgaggaggaggtccggggccctggtgtcggagaccagcagcaggaaaggttg
gtgcctaacgtgagacggagtcaccccaaagccgagtttgctttccacgtagtgggccga
gggtcccagacgggaggggcagccagacaggttaacccgcctgagggtttaaatatggtc
gggaaccggagggaggagggggagggaggcgaggggaagagaagggattcagacacgccg
ggaggcttgaggagccacaccgtttctcccaggaagaccatatacgtgtccctcgcagag
aaccatggaggagaggccggtaaaaacaaccacgtcgacggggaggacggagcctacaga
agcagtcggttcgccattgggttgagaccgcgcttctccaactacagcagtctgtcccag
acctacaggagcaaccactcaaaccacactgcccccaaccactcatacagccaggcggtg
ctgaagcagaagctgtctgtcccggaggatgagctgctccagcagtttaagagagaggag
gtcgcctcctctggaagctttagtgctcactacctgtccatgttcctgctcacagcagcc
tgcctcttctttctgctgctgggcctcatgtacctcaggatgaggggctctgggtcctcg
gaggtggatgaagtcattaagagccacccttttggcagcaagtttgacgagttgtataac
aagacggagaaggacctgatcctcaagctgctgctcaacctgcatgaccacctggcccaa
gtcgctggtcagtatgactgtggagaccagcagcatctaaacaggagcctgtccatggca
gaggcatctacgtatctacggtctcagaatcaggacttcgatggcttcattgagacctct
ctggagtggatcatcaagacaggccaggatgttgggatcaggctgacagggcaggtcgct
gacgagcctctgactgatgtctctgagatctctcggctggagtcctcgcatcccaagatg
ccgttcacatgccgcttccgcagagccttcctcaccgtcatcagcagagtctccctcatt
gcagttgtggtgggttgtgtgtggagcgtggtctgctacatgaagtttcgctggaggaga
gagaaggaggacacccggcagatgtatgacatggtggagaggatcatcgatgtgttgcga
agccacagtgaggcttgccaagagaaccaggacctgcagccgtacctgcccatcccccac
gtcagagactccctggttcagcctcaggaccggaagaaaatgaagaagatttgggagcga
gctgagaagttcctcgcagccaatgagtccaggattcggaaagagactcagaggatcggg
ggggctgacttcctggtctggaggtggatccagccgtctctcagttgtgacaagacgtcc
tccatgaactctaaagtctggcagggaaaagctttccctctggaccggagaaattccccc
cccaacagcctgactccatgtctgaagatcagaaacatgtttgacccgatcatggaggtt
ggggagaactgggatctagccatccacgaggccatcctggagaagtgcaacgacaacgac
ggtatcgtccacatcgctgttgacaagaactcccgagagggctgtgtctatgtcaagtgt
ctttctgcagagcactcggggagagcctttaaggcacttcacggctcctggtttgatggt
aagctggtgactgtgaagtatctgcgtttggaccgataccaccagcgcttccctcaggcc
cagggcagcagcacgcctctgaaggcctccagcccccccctgagcaccacaggcaccatg
aacactgtgccgcgcctgcagcaccgcggcgccggcaactcttcaggcttctcatga
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