Trematomus bernacchii (emerald rockcod): 117484386
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Entry
117484386 CDS
T09643
Name
(RefSeq) platelet-derived growth factor subunit A-like isoform X1
KO
K04359
platelet-derived growth factor subunit A
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04010
MAPK signaling pathway
tben04020
Calcium signaling pathway
tben04510
Focal adhesion
tben04518
Integrin signaling
tben04540
Gap junction
tben04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117484386
04020 Calcium signaling pathway
117484386
09133 Signaling molecules and interaction
04518 Integrin signaling
117484386
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117484386
04540 Gap junction
117484386
09142 Cell motility
04810 Regulation of actin cytoskeleton
117484386
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
tben04052
]
117484386
00536 Glycosaminoglycan binding proteins [BR:
tben00536
]
117484386
Cytokines and neuropeptides [BR:
tben04052
]
Cytokines
Growth factors (RTK binding)
117484386
Glycosaminoglycan binding proteins [BR:
tben00536
]
Heparan sulfate / Heparin
Growth factors/receptors
117484386
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDGF_N
PDGF
Motif
Other DBs
NCBI-GeneID:
117484386
NCBI-ProteinID:
XP_033988736
LinkDB
All DBs
Position
Unknown
AA seq
217 aa
AA seq
DB search
MRAAVWLLLAGCFCTAAEEAPLPRELLELLSGSEIRSISDLQRLLETQSVENEVMEETKH
RYHKDVSHSPLDLKRAHTHTHTRHRRSTVLEEALPAGCKIRSVVYQIPRSAVDSSAANFL
LWPSCVELQRCTGCCNTGNMRCRAARTHTRTVKELLTAKAEGQSVIQISSHLNNVAKVEF
VRRRPKLREVQVKLEDHLECTCTNRRSTHTHTDNGIR
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgagagccgcggtgtggctcctgctggccggctgtttctgcaccgctgctgaggaggct
cctctcccccgggagctgctggagcttctgtccggcagtgagatccggagcatcagcgac
ctccagcggctgctcgagactcagtccgtagagaacgaggtgatggaggagaccaaacac
agataccacaaggacgtctctcacagccccttggacctgaagagagcacacactcacacg
cacaccagacacaggagaagcaccgtgttggaggaggctcttcccgctggatgtaagatc
cgctcggtggtttatcagatcccccgcagcgccgtggactcctccgccgctaacttcctg
ctgtggccgtcctgcgtggagctgcagcgctgcaccggctgctgcaacacagggaacatg
aggtgcagagcggcacgtacacacacccgcactgtgaaggaactactcacagccaaagca
gagggacagtctgtgattcagattagctctcatctaaacaatgtggcgaaagtggagttt
gtgcggcggcgtccgaagctgagggaggtgcaggtgaagctggaggaccacctggagtgc
acctgtaccaacagacgctccacacacacacacactgacaacggtatcaggtga
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