Trematomus bernacchii (emerald rockcod): 117484604
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Entry
117484604 CDS
T09643
Symbol
psen2
Name
(RefSeq) presenilin-2 isoform X1
KO
K04522
presenilin 2 [EC:3.4.23.-]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117484604 (psen2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tben01002
]
117484604 (psen2)
Peptidases and inhibitors [BR:
tben01002
]
Aspartic peptidases
Family A22: presenilin family
117484604 (psen2)
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Motif
Pfam:
Presenilin
Tmemb_55A
DUF3377
Motif
Other DBs
NCBI-GeneID:
117484604
NCBI-ProteinID:
XP_033988927
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Position
Unknown
AA seq
426 aa
AA seq
DB search
MNASDSEEDSYNERSALVESPPLPSYRPDPPIDPPDKRPGLSRRSASPQGVQGVSEEEEE
EELTLKYGAKHVIMLFVPVTLCMIVVVATIKSVSFYTEKTDQQLIYTPFSENVSSVGRRL
LNSVLNTIIMISVIVVMTVFLVLLYKYRCYKFIHGWLILSSLMLLFWFSFMYLGEVFRTY
NVAVDYPSVGLLIWNFGAVGMVCIHWKGPLPLQQLYLILISALMALVFIKYLPEWSAWVI
LGAISIYDLVAVLSPKGPLRMLVETAQERNEPIFPALIYSSAMMWTVGMASPGDAHETGD
ITTARHHDEEAEHSGEGAEPEACRARSITEEDLEEDRGVKLGLGDFIFYSVLVGKAAATG
GDWNTTIACFVAILIGLCLTLLLLAIFKKALPALPISITFGLVFYFSTDFLVQPFMDNLA
SNQFYI
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcctcagacagcgaggaggactcgtacaacgagaggtcggctctggtggagagc
ccccccctcccctcctacagacccgacccccccatcgacccccccgacaagaggccgggg
ctcagcaggaggtctgcctctccgcagggggtccagggggtctctgaggaggaggaagag
gaggagctgaccctaaagtacggagcgaagcatgtgatcatgctcttcgtcccggtgacg
ctctgcatgatcgtcgtcgtggcaaccatcaagtccgtcagcttctacacggagaagacg
gaccagcagctgatctacacccccttctcagagaacgtgtcctcggtgggccggcgcctc
ctgaactcggttctgaacacgatcatcatgatcagcgtcatcgtggtgatgaccgtgttc
ctggtgctgctctacaagtaccgctgctacaagtttatccacggctggctgatcctctcc
tctctcatgctgctcttctggttcagcttcatgtacctgggagaggtgtttaggacctac
aacgtggcggtagactacccctcggtggggctgctgatctggaacttcggcgcagtgggc
atggtgtgtatccactggaagggccctctgcctctgcaacagctctacctcatcctcatc
agcgccctcatggccctcgtcttcatcaaatacctcccagagtggtccgcctgggtcatc
ctgggggccatctccatctacgacctggtggcggtgctctctcccaaagggcctctccgc
atgctggtggagacggcacaggagcgcaacgagcccatcttccccgccctcatctactcc
tccgccatgatgtggacggtggggatggcgagcccgggcgacgcacacgagacaggtgac
atcactacagcaaggcatcatgacgaggaggcggagcacagcggcgagggggcggagcct
gaagcctgcagagcgaggtcgataacagaggaagatctggaggaggaccggggggtgaag
ctgggtctcggggacttcatcttctacagtgttctggtggggaaagctgcagcgacgggt
ggagactggaacacgaccatcgcctgcttcgtggccatcctcatcggcctgtgtctcacg
ctgctgctgctggccatcttcaagaaggcgctcccggctcttcccatctccatcaccttc
ggactggtcttctacttctccactgacttcctggtgcagcccttcatggacaacctggca
tccaatcagttctacatctga
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