Trematomus bernacchii (emerald rockcod): 117485402
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Entry
117485402 CDS
T09643
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tben04515
]
117485402
Cell adhesion molecules [BR:
tben04515
]
Cadherins
Protocadherins
117485402
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
117485402
NCBI-ProteinID:
XP_033989850
LinkDB
All DBs
Position
Unknown
AA seq
822 aa
AA seq
DB search
MTKTIGYRDWRWQVLWWHHFFLLWTTINGQTRYSIPEELKQGSVVGNLAKDLSLGLSDIL
DRKMHIASEAGEQYFSVDAGKGELVVNDRIDREALCGQSASCVLTLQVVVQNPLQSHRIE
VEIRDINDNSPNFLTQEINLKIPESVALGRRFPLESAKDPDVGSNSLKTYSLSKNDYFAL
KSKDTKNGKAVPELVLEKPLDREKTALHQLLLTALDGGNPVKSGTCTIIITVLDNNDNFP
IFNENEYKVSLKENSTKGTFVIKLKASDADDGVNGEVKYYFGSRTPDFVLSTFDINEITG
QIILKGALDYESAKSYLIDITAKDRGIPEMEGNCRVQLDIEDINDNAPEIVLTSKPSPVP
EDAPSGTVVALISARDFDSGNNGRVMLQLPKRSPFTLKPSYSNNYQLVTSGALDRESFSE
YNIEITATDSGSPPLSSKKSIPVGISDVNDNPPMFTQPFYNVYLKENGVPGSILYSVSAS
DLDFGENAKISYSILDSKVQDVSVSSYVYINSDNGSIYSMHSFDYEKLKVFQIQVQAKDQ
GSPSLSSNTTVHVFILDQNDNAPAVIYPSSAVLGSLSHQRMSRSAKAGHLVTKVTAVDAD
SGHNAWISYKLAEATDASLFTVNLYTGEVRTKRAASEQDDSSQRLLIEIKDDGEPMQSAT
VTVSILLEDGLHEPILDLRQKTAEPSRKTGRITLYLMLSLASVSVLSLVTFLILAVKCMR
NSSSSGSCCMRRSDCDNYKNPNRNMQIQLNTDGPIKYVEVLGGDMMSQSQSFRSCMSPMS
EYSDFTLIKPSSTTDFTEVISVLDASLPDSTWTFESQQVSRQ
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagacaataggataccgagactggagatggcaggtgctttggtggcatcatttc
tttctcttgtggactacaataaacggacagactcggtacagcatcccggaggaactaaaa
cagggctctgtggtaggaaatctagccaaagatctgagtctcggactatcagacatttta
gatcgtaaaatgcatatcgcctctgaggctggagagcagtattttagtgtggatgcaggg
aagggcgagctggtggtgaatgatagaatagacagagaggctttatgtggacaaagcgcg
agctgtgttttaactctgcaagtagttgttcaaaatcctttgcagtctcatcgtattgaa
gtggaaattagagatataaatgacaattctcctaattttcttacacaggaaattaacctt
aaaataccagaatcagtggctcttggcagacgttttcccttggaaagtgcaaaagaccct
gatgttggaagcaattctttaaaaacgtactccctgagcaaaaacgattattttgctctt
aaatctaaagacacgaaaaatggtaaggctgtaccagaattggtgttagaaaagccattg
gaccgggaaaagactgctctccatcagcttttgttgactgcattagatggaggtaaccct
gttaaatctggaacctgtactattattatcactgtacttgataacaacgacaattttcca
atattcaatgaaaatgagtacaaagtgtctttgaaggagaacagcaccaaaggaacattt
gtgatcaaacttaaagcttcagatgcagacgacggtgttaatggtgaagttaaatattat
tttgggtctcgcactccagactttgtcttatcaacatttgatattaatgaaataacagga
caaatcatattaaaaggagcattagattatgagagtgctaaatcataccttatcgatata
actgctaaagacaggggcattcccgaaatggagggtaactgtcgtgtacagttggacata
gaggacataaatgataatgctccagaaattgtgcttacatcaaaacctagtcctgtgccc
gaggacgcaccaagtggcacagttgtggctttaatcagtgcacgagactttgactccgga
aataacggtagagtgatgttacagcttccaaaacggtctcctttcactctgaaaccgtcc
tactctaataattaccagctggtcactagtggtgctttggaccgagagagtttctcagaa
tataatattgagataacagccactgattcaggctctcctcctctgtccagtaagaaaagc
atacctgtcggcatcagtgatgtgaatgataacccccctatgttcactcagccattctat
aatgtgtatttaaaagagaatggggtgccaggctctattctgtactcagtatcagcatct
gaccttgattttggtgaaaacgctaaaatatcttactccatactggactctaaagtacag
gacgtttctgtctcgtcttatgtttatattaactcagataacggcagcatctacagcatg
cactcgtttgactatgagaaactgaaggtgtttcagatccaggttcaggcaaaggatcag
ggatctccgtctctcagcagcaacaccactgtccatgtttttatcctggaccagaacgac
aatgcccccgctgttatttacccctcctccgctgtcctgggctccctctctcaccagagg
atgtcccgctccgctaaagcgggtcacctggttactaaggtgacggccgtggacgctgac
tcgggccataacgcctggatctcctacaaactggcagaggccacagacgcctctctgttc
actgtcaacctgtacacaggggaggtgaggactaaacgcgctgcgtccgagcaggacgac
tcctctcagaggctgcttatagagatcaaggacgacggggaaccgatgcagtccgccacc
gtgacggtgtccatcctgctggaggacggcctccatgagcccatcttagacctccgacag
aaaacggccgagcccagcaggaaaactgggagaatcaccctttatttgatgctctctctg
gcctcggtgtccgtgctgtctctggtgacatttctcatcttagctgttaaatgcatgagg
aacagcagcagcagcggtagttgctgcatgagacgcagtgactgtgataattacaagaac
cccaacagaaacatgcagattcagctcaacactgatggacctataaagtacgtggaggtc
ctgggaggagacatgatgtctcagagtcagtccttcaggtcctgcatgtctccaatgtca
gagtacagtgatttcactttgattaagcccagcagcaccactgactttacggaggtgatc
agtgttctggatgcgtctttacccgacagcacgtggacctttgagagccagcaggtgagc
agacagtaa
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