Trematomus bernacchii (emerald rockcod): 117485450
Help
Entry
117485450 CDS
T09643
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tben04515
]
117485450
Cell adhesion molecules [BR:
tben04515
]
Cadherins
Protocadherins
117485450
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
117485450
NCBI-ProteinID:
XP_033989897
LinkDB
All DBs
Position
Unknown
AA seq
819 aa
AA seq
DB search
MWTKFPAWQVFLWWHHFFLLWSTIEGQTRYSIPEELKQGSVVGNLAKDLGLVVSELYPRK
LRITSEAGKQYLSVDLGKGELVVIDRIDREELCGQRPSCVLPLELVIDNPLQLHRVEIEI
QDTNDNSPIFFTKEKVVKIAELVNPGARFPLESAQDLDVGSNSVRTYLISKNDHFKLAVK
NHKDGRKIPELVLEKPLDREKLPVHNLILTAVDGGDPVRSGTSEIKVIILDINDNAPVFE
KQVYEANVSEKATPGTEILQVKAIDVDEGLNGVIEYVFAEQTTNLIVSLFNIEPSTGVIV
VKGILDHETNSLHRFDVTAKDKGNPEMDGHCGVEIKIVDINDNIPEIIVTSLTTPIPEDS
AIGTVIALISAKDPDSGDNGKIKLSVSSKSPFKLNPSVSNHYSLVTNGPLDRETNSQYSV
KIIATDSGKPPLSSEKIISVELLDVNDNPPVFSQPSYAVYVKENHAPGKILFSISASDMD
FGENSKISYSILDSKVQDVSVSSYVYINSDNGSIYSMHSFDYEKLKVFQIQVQAKDQGSP
SLSSNTTVHVFILDQNDNAPAVIYPSSAVLGSLSHQRMSRSAKAGHLVTKVTAVDADSGH
NAWISYKLAEATDASLFTVNLYTGEVRTKRAVSEQDDSSQRLLIEIKDDGEPMQSATVTV
SILLEDGLHEPILDLRQKTAEPSRKTGRIALYLILSLASVSVLSLVTFLILAVKCMRNSS
SSGSCCMRRSDCDHYKNPNRNMQIQLNTDGPIKYVEVLGGDMMSQSQSFRSCMSPMSEYS
DFTLIKPSSTTDFTEVISVLDASLPDSTWTFESQQVSKT
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgtggaccaaatttcctgcatggcaggtgtttttgtggtggcatcatttctttcttttg
tggagtacaatagaaggacagactcgttacagcattccggaggaactgaaacagggctcc
gttgtaggaaatctagccaaagatcttggtctggttgtatctgaactgtacccacgtaaa
ttgcggataacctcggaagctggtaagcagtatttaagcgtggacttggggaagggggaa
ctggtggtgattgataggatagatagggaggaactgtgtggacaaagaccgtcatgtgtg
ttgcctttggaactagtcatagataatcctctacaactgcatagggtcgagattgaaata
caggatacaaacgacaattctcctattttttttactaaggagaaagtggtgaaaattgca
gagctggttaatccaggcgcccgatttccattagaaagtgcacaggatttggatgttggc
tctaattctgtacgtacttaccttattagcaaaaacgatcatttcaaattggctgttaaa
aaccacaaagacggtagaaaaatccctgaactggtcctcgaaaagccacttgatagagaa
aagctgcctgtgcacaatcttatcctcaccgctgtagacggtggagatcctgtgcgctca
gggacatctgaaattaaagttataatacttgacataaatgataatgcgcctgtgtttgaa
aaacaggtatatgaggctaatgttagcgaaaaggcaacacctggaactgagatactgcag
gttaaagctatagatgtagacgaaggactaaatggagtaatcgaatatgtgtttgcagag
caaactacaaatctgattgtatcattgtttaacattgaaccttctactggagttattgtt
gtcaaaggaattttagaccatgaaactaactctttacatagatttgacgtcactgctaaa
gataaaggaaatcctgagatggatgggcattgtggtgtcgaaattaaaatagtagacatt
aacgacaatattcctgaaataatagtaacttctctaacaacacctattccagaagactct
gctattggaaccgtaattgcgttgataagtgcaaaagacccagattctggtgacaatggt
aaaattaagttaagcgtgtcttcaaaatcacccttcaagttaaatccttcggtgtctaat
cattactcattagtgacgaatgggccacttgaccgtgaaacaaatagccagtatagtgtc
aagatcattgctactgattctggaaagcccccattatcgagtgaaaaaatcatatctgtt
gaattgttagatgtaaatgacaacccaccagtgttctctcagccttcttatgccgtatat
gtaaaagagaaccatgctcctgggaagattttgttctcaatatcagcgtctgatatggat
tttggtgaaaactccaaaatatcctactccatactggactctaaagtgcaggacgtttct
gtctcgtcttatgtttacattaactcagataacggcagcatctacagcatgcactcgttt
gactatgagaaactgaaggtgtttcagatccaggttcaggcaaaggatcagggatctccg
tctctcagcagcaacaccactgtccatgtttttatcctggaccagaacgacaatgccccc
gctgttatttacccctcctccgctgtcctgggctccctctctcaccagaggatgtcccgc
tccgctaaagcgggtcacctggttactaaggtgacggccgtggacgctgactcgggccat
aacgcctggatctcctacaaactggcggaggccacagacgcctctctgttcactgtcaat
ctgtacacaggggaggtgaggactaaacgcgctgtgtctgagcaggacgactcctctcag
aggctgcttatagagatcaaggacgacggggaaccgatgcagtccgccactgtcacggtg
tccatcctgctggaggacggcctccatgagcccatcttagacctccgacagaaaacggcc
gagcccagcaggaaaactgggagaatcgccctttatttgattctctctcttgcctcggtg
tccgtgctgtctctggtgacttttctcatcttagcggttaaatgcatgaggaacagcagc
agcagcggtagttgctgcatgagacgcagcgactgtgatcattacaagaaccccaacaga
aacatgcagattcagctcaacactgatggacctataaagtacgtggaggtcctgggagga
gacatgatgtctcagagtcagtccttcaggtcttgcatgtctccaatgtcagagtacagt
gatttcactttgattaagcccagcagcaccactgactttacggaggtgatcagtgttctg
gatgcttctttacccgacagcacctggacctttgagagccagcaggtgagcaaaacataa
DBGET
integrated database retrieval system
