Trematomus bernacchii (emerald rockcod): 117486749
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Entry
117486749 CDS
T09643
Symbol
c9orf72
Name
(RefSeq) guanine nucleotide exchange C9orf72 homolog
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117486749 (c9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117486749 (c9orf72)
Membrane trafficking [BR:
tben04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
117486749 (c9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C9orf72-like
DUF7645
Motif
Other DBs
NCBI-GeneID:
117486749
NCBI-ProteinID:
XP_033991172
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
MSSGCPPQSPAVAKSEVAVEGECPLLAATFAYWDNILGPRVRHIWTPKGEQLMFLSDGEV
TFLANHTLNGEILRSAECGAVDVKFFVLAEKGVIIVSLIFDGELKGDKNTCALSIILPQT
ELAFYLPLHTICVERLKHVIRKGRIWMQKGYNIISVLSLEIIPIMELLASMKSHHVPEDI
DIKDTVLNDDDIGDSCHEDFLHKAVSSHLQTCGCSIVVGSNPEKVNKIVRTLCLFLTPAE
RKCSRLCKADSSFKYDTGLFVQGLLKDSTGSFVLPFRQVLYSPYPTTHIDVDINTVKQMP
PCHEHTYNQRRYMRSELSALWKTDSEDDIPPETVIHTDETFTPDLNIFQDVMHKDTLVKS
FIDEVFMLKPGLSLRSTYLAQFLLLLHRKALTLLKYIEDETQKGKKPFRSLRNLKTDLDL
TVEGDLHIVMAFAEKLRAGLHSFVFSKPFYTSMQERDVLMTF
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccggctgtcccccccagtcaccagctgtggctaagtctgaggtagcagtagag
ggagaatgcccgctgctggcggcaaccttcgcctactgggacaacatcctgggtccacgg
gtgcgccacatctggacaccaaagggagagcagctgatgttcctcagcgatggagaggtc
acatttttggccaatcatacactaaacggggagatcctgcgaagcgctgagtgtggcgcc
gtggacgtgaagttctttgtcctggcggagaagggcgtcatcattgtgtctcttatcttc
gatggcgagctgaagggggataagaacacatgtgccttgtccattatcctgcctcaaaca
gagctggccttctaccttcctctgcacaccatctgcgtggagaggctaaagcacgttatc
cgcaagggacgcatttggatgcagaagggctacaacatcatctcggtgctgagcttggag
atcatccctatcatggagctgttggcctctatgaagtctcaccatgtgccagaagatata
gacataaaagacacggtgctaaatgatgatgacatcggggacagctgccacgaggatttc
ctccacaaagccgtcagctctcatctgcagacttgcggctgttcaatagtagtcggaagc
aacccggagaaagtaaataagattgtgcggactctctgcctcttcctcaccccagcagag
aggaagtgctcccgcctctgcaaggctgactcttctttcaaatatgacacaggccttttt
gttcagggtctgctcaaggactccacgggcagcttcgtcctgcccttccgccaggtgctc
tactccccgtatcccaccacgcacatcgacgtggacatcaacacggtgaagcagatgccg
ccgtgccacgagcacacatacaaccagcggcgctacatgcgctccgagctcagcgcgctc
tggaagacggacagtgaggacgacatcccccccgaaacagtcattcacaccgacgagacc
ttcacgcctgacctgaatatatttcaagacgtcatgcataaagacactttggtgaagtcg
tttatagacgaggtgttcatgctgaagccgggcctgtccctgcggagcacctatctggcc
cagttcctgctgctgctccacaggaaggccctcacattgctcaagtacatcgaggacgaa
acgcagaaagggaagaagccgtttcgatccctgcgcaacctaaagacagacctggatctg
acggtggagggggacctgcacatcgtaatggccttcgccgagaagctgagggcgggactg
cactcgttcgtgttcagcaagccgttctacaccagcatgcaagagcgagacgttctcatg
accttctga
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integrated database retrieval system
