KEGG   Trematomus bernacchii (emerald rockcod): 117487826
Entry
117487826         CDS       T09643                                 
Symbol
cd40lg
Name
(RefSeq) CD40 ligand
  KO
K04389  tumor necrosis factor ligand superfamily member 6
Organism
tben  Trematomus bernacchii (emerald rockcod)
Pathway
tben04010  MAPK signaling pathway
tben04060  Cytokine-cytokine receptor interaction
tben04068  FoxO signaling pathway
tben04210  Apoptosis
tben04217  Necroptosis
tben05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:tben00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    117487826 (cd40lg)
   04068 FoxO signaling pathway
    117487826 (cd40lg)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    117487826 (cd40lg)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    117487826 (cd40lg)
   04217 Necroptosis
    117487826 (cd40lg)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    117487826 (cd40lg)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tben04147]
    117487826 (cd40lg)
   04052 Cytokines and neuropeptides [BR:tben04052]
    117487826 (cd40lg)
   04090 CD molecules [BR:tben04090]
    117487826 (cd40lg)
Exosome [BR:tben04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   117487826 (cd40lg)
Cytokines and neuropeptides [BR:tben04052]
 Cytokines
  Tumor necrosis fators
   117487826 (cd40lg)
CD molecules [BR:tben04090]
 Proteins
  117487826 (cd40lg)
Motif
Pfam: TNF BiPBP_C
Other DBs
NCBI-GeneID: 117487826
NCBI-ProteinID: XP_033992438
EnsemblRapid: ENSTBNG00005015105
LinkDB
Position
Unknown
AA seq 232 aa
MINTYQTSVAAPPVPPRLSRSQQVLFPVPSQGHSKSLIRFLVGVVVLHLFLSVGGFIYLR
QNDTMHQSQLPSGEGKGAYRSSGKQETSNRALARMVVKQQDKKQVLKRVKGSGYLQWDMD
HSVLKSVSYYHDMWLTIEQPGDYYVYSRVTFSKGDTTRPLVSMVKLRESEKKEEKIVMQA
YCNLNISTQQLCTATQGGLVTLEKGDQLSVWLQDLSLLTYMEGATAFGIFRL
NT seq 699 nt   +upstreamnt  +downstreamnt
atgatcaacacttaccagaccagtgtcgctgcaccgccggtgcctccacgcctcagccgg
tcccaacaggtcctcttcccagttccatcacaaggccacagcaagtctctcatcaggttc
ctggtcggtgtagtggtgctgcacttattcctttcagtcggaggattcatctacctgagg
caaaatgacacaatgcatcaatcccagctcccatcaggtgaaggaaaaggtgcctatcgc
tcatcaggaaagcaggaaacatcaaacagagccctggcccgcatggtagtcaagcagcaa
gataagaagcaagttctgaaacgagtcaaaggatcgggttatctccagtgggacatggac
cactcagttttaaagagcgtcagttactaccacgacatgtggttgaccatcgagcagcct
ggcgactactacgtctactccagggtgaccttctccaagggcgacaccacaaggccgctg
gtcagcatggtgaagctgagggagagtgagaagaaagaggagaagatagtgatgcaggcg
tactgcaacctgaacatcagcacacagcagctgtgcacggccacacagggagggctggtc
acactggagaaaggggaccagctcagtgtctggttacaagatctttcactgttgacctac
atggagggggccacagcctttgggatattcagactgtag

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