KEGG   Trematomus bernacchii (emerald rockcod): 117489863
Entry
117489863         CDS       T09643                                 
Symbol
rad18
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RAD18
  KO
K10627  E3 ubiquitin-protein ligase RAD18 [EC:2.3.2.27]
Organism
tben  Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:tben00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tben04121]
    117489863 (rad18)
   03400 DNA repair and recombination proteins [BR:tben03400]
    117489863 (rad18)
Enzymes [BR:tben01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     117489863 (rad18)
Ubiquitin system [BR:tben04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    117489863 (rad18)
DNA repair and recombination proteins [BR:tben03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    117489863 (rad18)
SSDB
Motif
Pfam: zf-RING_6 zf-C3HC4_2 SAP zf-C3HC4 zf-RING_2 zf-RING_UBOX zf-C3HC4_3 zf-RING_5 RING_XB3-XBAT31 zf-WRNIP1_ubi zf-C3HC4_4 zf-rbx1 POPLD DUF3150 RING_ZNF598
Other DBs
NCBI-GeneID: 117489863
NCBI-ProteinID: XP_033995305
LinkDB
Position
Unknown
AA seq 510 aa
MALHVEADLPPEVACLKNVDALLRCPICFDFLNISMMTKCSHNFCSLCIRKFLCYKMQCP
VCNAQATEQDLRTNRLLDELVVNFQAARQQLSKANVDTPPISPKNPASAVKCRTPKQRGQ
KCNSTVLSNFFQKMPKTSPAKKKRHDASDSQLTQRGKIQTVRTDNANDADLHSANARLPV
VVKEEPNDDEEVSSIQNLMSVKREAAGVPHSISTGDAMAHSSSLSKDIKPVIKVECPVCS
VSVPQQFINKHLDTCLTSGDRKESTRSSLCNTRRQMTKVVYNLLSTQELKRRLKECHLSM
QGPRDQLIKRHQEFVQIYNAQCDSLNPKPAEDIAKDLESNEKIRNQLKAKTKPVMVFTKN
QSEKDIDDVHSNYRKRHSSDFSRLIAQVQGHLETTKQTRIKQEVIVEGDDAQKTEAAESI
NGSVMKAEDEESDEEPPTKRMEWSSSPTHSEVSISSSISDIFGPEAVSNPQDTEGKPGQK
RASSTREDDATSSLVSGKRRRKNNDVKYVD
NT seq 1533 nt   +upstreamnt  +downstreamnt
atggccctacatgttgaagcagatttaccacctgaagttgcatgtctgaaaaatgtggat
gcccttcttcggtgtcctatttgctttgactttctcaacatttcaatgatgacgaaatgc
tctcacaacttctgctccttatgcatcaggaaatttctctgctataagatgcagtgtcct
gtttgcaatgcacaagcaacagagcaagatctaagaaccaaccgtttattggacgagctg
gttgttaacttccaggctgcaaggcagcagttgtcaaaagcaaatgttgacactcctcca
atatccccaaagaacccagcttcagctgtcaaatgcagaactcccaaacagagaggccag
aagtgtaacagtactgttttgagtaactttttccaaaagatgcctaaaacatctcccgcc
aaaaaaaaacggcacgatgcttctgattctcagttaactcagcgggggaaaatacagact
gtacgcaccgacaatgcaaatgacgctgacctacattcagcaaatgcacgacttccagtg
gttgtgaaggaagagccgaatgatgatgaggaggtgtcatctatccagaatttgatgtca
gtcaaacgggaggctgcaggagtcccgcacagtatcagcaccggggatgcgatggcacat
tcctcgtcactatcgaaagacataaagcccgtaatcaaagtggagtgccctgtgtgctct
gtaagtgtgccgcaacagtttatcaacaagcatctggacacgtgtctgaccagtggagac
aggaaggaaagcacgaggagctctttatgcaatacgagacgtcaaatgacgaaggtggtg
tacaacctgctgtccacgcaggagctgaagaggaggctgaaggagtgccatctctcaatg
cagggtcctcgagaccagctgatcaaaagacaccaggagttcgtccagatatataacgcc
cagtgtgattcactaaacccaaaaccagctgaagatattgccaaagatttggagtccaac
gagaagatcaggaatcaactgaaggctaaaaccaaacctgtcatggttttcacaaagaat
cagtctgagaaggatattgatgacgttcactcaaactacaggaagcggcacagcagtgac
ttttcacgcctgattgctcaggttcagggtcacttagagaccaccaagcagactcgtatc
aaacaggaagtcattgtggaaggagacgatgcacagaaaacagaggctgcagaatcaata
aatggctcggtgatgaaagcagaagacgaagaatctgacgaggagccacctacaaaaaga
atggaatggtcctccagccccactcacagtgaagtgtccatcagcagttccatctcagac
atctttggtccggaggctgtcagtaaccctcaagacacggaggggaaaccaggtcaaaag
agagcgtcgagcacgagagaagacgatgcaacatcctcgctcgtcagtggaaaacgacgg
cggaaaaacaacgatgtaaaatatgtcgattaa

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