Trematomus bernacchii (emerald rockcod): 117490319
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Entry
117490319 CDS
T09643
Symbol
smpd1
Name
(RefSeq) sphingomyelin phosphodiesterase
KO
K12350
sphingomyelin phosphodiesterase [EC:
3.1.4.12
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben00600
Sphingolipid metabolism
tben01100
Metabolic pathways
tben04142
Lysosome
tben04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
117490319 (smpd1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
117490319 (smpd1)
09143 Cell growth and death
04217 Necroptosis
117490319 (smpd1)
Enzymes [BR:
tben01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
117490319 (smpd1)
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Ortholog
Paralog
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Motif
Pfam:
Metallophos
ASMase_C
HTH_upst_double_PIN
SapB_1
Motif
Other DBs
NCBI-GeneID:
117490319
NCBI-ProteinID:
XP_033995911
LinkDB
All DBs
Position
Unknown
AA seq
598 aa
AA seq
DB search
MQLPSLPSWFLLTCSLVLLFGSCDPAPTSEQSRLVLMEQFSRPEVGFNWRNVTCPLCKAV
FTILDIALLSDTNEERVASAVREVCIRLHLADEQVCRQITELFRGDFIRALQQSFLWPTE
ACALLVGPSCGKFDIYAPWNLTLPKVPKPPVTPPSPPKPGSPQSRVLFLTDIHWDQEYAV
GSVADCNDPLCCRADSRAPKWRRREAGFWGTYSKCDLPLRTVENLLENAARDGPWDWVYW
TGDIPAHNIWSQTRKQQLSELTVISRLIHKYLGPNVTVYPAIGNHESTPVNSFPPPFVHG
NRSMSWLYDTMAEEWSAWLPEQALKTLRYGGFYTVEIQPGLRLVSLNMNFCARENFWLMV
NSTDPANQLQWLVHILQDSENKGEKVHIIGHIPPGLCLGSWSWNYYHIINRYENTISGQF
FGHTHMDEFEMFYDESTMSRPLGVAFIAPSATTYINLNPGFRVYYVDGNYKDSSRFVLDH
ETYILNLTTANQSPGAPSTPEQNPKWTLLYRATEAYGLTSLFPSDCDGLMRTFVNDDRSF
QKFWYYRHKGHVSEACKETCKTTVLCFLRSGRYDELEQCDFLNGFKGEMARAARKTLC
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgcagctcccctcgctgccgtcctggttcctgctcacctgctctctggtgctgttgttc
gggtcctgtgatccagcaccgacctcagagcagtccaggctggtgttgatggagcagttt
agccgccccgaggtcggatttaactggaggaatgtcacttgccccttgtgcaaagcagtg
tttaccatccttgatatcgcccttttgagtgacaccaacgaagagcgagtggcgagtgca
gtgagagaggtgtgtatccgtctccacctggctgatgagcaggtgtgtcgacaaataacg
gagttgttcaggggcgacttcatccgggccctgcagcagtccttcctgtggcccactgaa
gcgtgtgccctgctggtggggccgtcctgcggcaaatttgacatctacgccccctggaac
ctcaccctgccgaaggtccctaaacctcctgttacaccaccctctcctcccaaacctgga
tctccacagagcagagtcctgtttctaactgacatccactgggaccaggagtatgcagtg
ggcagcgtcgcagactgcaatgaccctctgtgctgtcgtgcagactcgcgcgctcccaag
tggaggcgcagggaagcggggttctggggaacctacagtaagtgtgacctgcctctgagg
accgtggagaaccttctggagaacgctgccagagacggaccctgggactgggtctactgg
accggagacatcccagcgcacaatatttggtctcaaaccaggaaacagcagctgtcggag
cttactgtcatctccaggctcatccacaaatacctgggacccaatgtgacagtgtaccct
gctatagggaaccatgagagcacaccagtgaacagcttccccccgccctttgttcatggc
aacaggtccatgtcctggctttacgacacgatggcagaggaatggtccgcatggttacca
gagcaggctttgaaaactttgagatacggaggcttctacacagtggagattcagcctggt
ctgaggctggtctctctcaacatgaacttctgtgctcgagagaacttctggctgatggtg
aactctacagatcctgctaaccagctgcagtggctggtccatattctccaggacagtgag
aacaagggagagaaggttcatatcatcggtcacatcccaccgggcctctgtcttggcagc
tggagctggaactattatcacattataaacagatatgaaaatacaatttctgggcagttc
tttggccatacacacatggatgagttcgaaatgttttatgacgagtcgacaatgagtcgc
ccattaggagtggctttcattgctcccagtgccactacttacatcaatcttaacccaggt
ttccgtgtttattatgtggatgggaattacaaagacagctctcggtttgttcttgaccat
gaaacctacatcctgaacctcacaacggcaaaccaaagtccaggagcgccgagtaccccg
gagcagaaccccaaatggaccctgctgtaccgcgccaccgaggcctacggtctgaccagc
ctcttcccgtctgactgcgacgggctgatgcggaccttcgtcaacgatgaccgcagcttc
cagaagttctggtactacagacataaagggcacgtgtcggaggcctgcaaggagacgtgc
aaaactacagtgttgtgcttcctgcgcagcgggcgctacgacgagctggagcagtgcgac
ttcctcaacggctttaaaggagagatggcccgcgctgccagaaaaaccctctgttga
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