Trematomus bernacchii (emerald rockcod): 117490686
Help
Entry
117490686 CDS
T09643
Name
(RefSeq) LOW QUALITY PROTEIN: platelet-derived growth factor receptor beta-like
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04010
MAPK signaling pathway
tben04020
Calcium signaling pathway
tben04510
Focal adhesion
tben04518
Integrin signaling
tben04540
Gap junction
tben04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117490686
04020 Calcium signaling pathway
117490686
09133 Signaling molecules and interaction
04518 Integrin signaling
117490686
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117490686
04540 Gap junction
117490686
09142 Cell motility
04810 Regulation of actin cytoskeleton
117490686
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
tben01001
]
117490686
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
tben04090
]
117490686
Enzymes [BR:
tben01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
117490686
Protein kinases [BR:
tben01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
117490686
CD molecules [BR:
tben04090
]
Proteins
117490686
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_PDGFR_d4
Ig_3
I-set
Ig_2
ig
VEGFR1-3_N_Ig-like
V-set
Ig_VEGFR-1-like_5th
C2-set_2
Baculo_11_kDa
Zwei_Ig_N
F13C5_C
Orf78
Motif
Other DBs
NCBI-GeneID:
117490686
NCBI-ProteinID:
XP_033996356
LinkDB
All DBs
Position
Unknown
AA seq
1029 aa
AA seq
DB search
MASTRGRTGSLNLLHFLLGVFLVPSFLSLELLPSANQVLLNSSSNYSVVCSGWSQVTWLL
PAVPEGGVIQVEPLGSSSVLRLLNASWRDSGRYTCEEAGSPERRQVDVFIPGTGPEEWFV
PRLSGVVMQVGLEDTVPCGVSDPRLNVSLFERHSRTPVTTATYEPGRGFTGKLNDTSYTC
TATGGGAESQSQVYYVFSIVVPQQVEVYLSVSRSVLKVGESLMVNCTVRDIDMVFFTWDF
PRRQEVEPLTDFLPNQIRSFVNISSATVEDSGVYVCEVQETLQGQTAKKNVTITVLERGY
LLLWPSGETHLSALLHHTVTLSVEADAHPPPTVLWTKDNNTVATETSAVNTTHLTGSRYL
STLTLVGVRLHQTGSYTASVSNEDEAEEVVFNLEVKAPPRITSLSEVGSQEMLCVAEGAP
PPNITWYTCHSSHRCSNVTGGWRSKSAASEDNVTKDIGITTVRSVLSLQALTSVSAVRCE
ARNSAGRRTRDRHVQSSSLLSQVLVLAAVLVLVVIAIFFLIVLIVLWRKKPRYEARWKLM
ESVSPDGPQNILDLHSWEIPRNNVVLGQVLGSGAFGRVVEASVSDLIHSHSNTKVAVKMV
KQRSGVQSLVSELKVLMHIGPHLNLVNLLGACTRGGPVYLITEFCRHGDLVNYLQRNKHT
FLQSDTHTKSDGDGGYMDMTSETQYVTVKELSPAHIQPAEYEELCTPAGQQEAPQPLSAA
PPLSLMDLLSFSFQIAQAMDFLSSRNVVHRDLAARNVLVCEGKLLKVCDFSLARDLMKDQ
DYIARGTSFLPVRWMSPESLFQNLFSCQSDVWSYGVLLWELFSLGASPYPELPRTQDFCS
SLKTGNRMTRPEHAPLNMYDLMKVCWAESPQSRPSFSSLVVSVGNLLMEDYRKRYLQLTE
DFLSSPAVLRSRRSSPGADGGPTDAQKHGSPDAQVLEVGPEEAGSSHTTYIIPITDVTIE
TRGGAAQDAASPQLSQSQDTQEGTSPEDTQEGTSPEDTQEGTSPEDRQEGTSPEDRQEGT
SLEEEESSL
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaccagaggacgaacaggaagtttaaacctgctgcacttcctgttgggtgtg
ttcctggttccttccttcttgtctctggagctgcttccatcagccaatcaggttctgctc
aacagcagctccaactacagcgtggtctgttctgggtggagtcaggtgacctggctgtta
cctgcggtccctgagggaggggttattcaggtggagcctctggggtccagcagcgtcctg
cggctcctgaacgcctcatggagggattcaggtagatacacctgtgaggaggctgggtct
cctgagaggagacaggtggacgtcttcatacctggcacaggtccagaggagtggtttgtc
ccgaggctctcaggtgtggtgatgcaggtggggctggaggacaccgtcccctgcggtgtt
tctgacccccggctcaacgtctctctgttcgagcgtcacagcaggacccccgtcaccacg
gcaacatacgagccggggcggggcttcaccgggaaacttaacgacacgtcatacacctgc
actgccaccggggggggggcggagtcacagagccaggtgtactacgtgttcagcatcgta
gtccctcagcaggtggaggtgtacctgtctgtctctcgctcggtgctgaaggtgggtgag
tctctgatggtgaactgcacggtgagagacatcgacatggtgtttttcacctgggacttc
ccccgcagacaggaggtggagcctctgacagacttcctgcccaatcagattcgctccttt
gtgaacatctcctcggcaacagtggaagattcaggtgtgtatgtgtgtgaggttcaggag
acgttgcagggacaaactgcgaagaagaacgtcaccattacagtgctggagcgggggtat
ctgctgctctggccctcaggtgagactcacctgtcagccctccttcatcacacggtgacg
ctcagtgtggaggccgacgcccaccccccccccacagtcctctggaccaaagacaacaac
accgtcgccacggaaactagtgccgtcaacaccacacacctgacaggaagcaggtacctg
agcacgctcacgctggttggagtccggctgcatcagacaggaagttacacggcgagcgtt
tccaatgaagacgaagcagaggaggtcgtcttcaatctggaggtcaaagcaccccccagg
atcacgtctctgtcggaggtcggcagtcaggagatgctgtgtgtcgctgagggagctccg
ccccccaacatcacctggtacacctgtcacagctcacacaggtgcagtaatgtgactggc
ggttggaggagcaaatcagcagcctctgaggacaacgtcaccaaggacataggcatcacc
acggtgcgcagtgtgttgagtctgcaggctctcacctcagtgtcagctgttcgctgtgaa
gccagaaactctgcaggacgtcgaacaagagaccgccacgtccagtcctcctctctcctg
tctcaggtcctggttctggcagcagttctggttctggtcgtcatcgccatcttcttcctc
atcgtcctcatcgtcctctggagaaagaagccgcggtacgaggcccgctggaagctgatg
gagtcggtgagtccggacggaccgcagaacatcctggacctccacagctgggagataccc
cggaacaacgtagtactaggtcaggtgttgggttcaggggcattcggccgtgttgttgag
gcgagcgtctctgacctgattcactctcattctaacactaaagtggccgtcaagatggtg
aaacagcgcagtggggtccagtccctggtctcggagctgaaggtcctcatgcacatcggt
cctcacctgaacctggtcaacctgctgggagcgtgcacgagaggaggacctgtctatctg
atcactgagttctgtcgtcatggagacctggtgaactacctgcagaggaacaaacacacc
ttcctgcagagcgacacacacacaaagagtgatggtgatggaggctacatggatatgacc
tcagagactcagtacgtcaccgtgaaagagctaagccccgcccacatccagcctgcggag
tacgaggagctgtgcacccccgcaggccagcaggaggcaccgcaacccctcagcgccgcc
ccccccctcagcctcatggacctcctcagcttctccttccagatcgcccaggccatggac
ttcctgtcctccagaaacgtcgtccacagggacctggcagccaggaacgtcctggtctgt
gaggggaagctgctgaaggtctgtgacttcagtctggccagagacctgatgaaggaccag
gactacatcgccagagggaccagcttcctgcccgtcaggtggatgtctccggagagcctc
ttccagaacctgttcagctgtcagagcgacgtctggtcctacggggtcctgctgtgggag
ctcttctctctgggtgcgagtccgtaccccgagctgccgaggactcaggacttctgctcg
tctctgaagacaggaaacaggatgacccgccccgaacacgcccctctcaacatgtacgac
ctgatgaaggtgtgttgggcggagagtcctcagtccagaccctccttctcctcgctggtg
gtctcggtggggaacctgctgatggaggactacaggaagcgctacctgcagctgacggag
gacttcctgtccagtccggctgtgctcagatccagacggagttcaccgggagctgatggg
ggtccgacggacgctcagaaacatggaagccccgatgctcaggtattggaggtggggcca
gaggaggcaggctcctcccacacgacctacatcatccccatcactgacgtcaccatagaa
accagggggggggccgcgcaggacgcagccagccctcagctgtcccagtctcaggacaca
caggaggggacatcacctgaggacacacaggaggggacatcacctgaggacacacaggag
gggacatcacctgaggacagacaggaggggacatcacctgaggacagacaggaggggaca
tcacttgaggaagaggagagctctctgtga
DBGET
integrated database retrieval system
