Trematomus bernacchii (emerald rockcod): 117490686
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Entry
117490686 CDS
T09643
Name
(RefSeq) LOW QUALITY PROTEIN: platelet-derived growth factor receptor beta-like
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04010
MAPK signaling pathway
tben04020
Calcium signaling pathway
tben04510
Focal adhesion
tben04540
Gap junction
tben04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117490686
04020 Calcium signaling pathway
117490686
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117490686
04540 Gap junction
117490686
09142 Cell motility
04810 Regulation of actin cytoskeleton
117490686
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
tben01001
]
117490686
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
tben04090
]
117490686
Enzymes [BR:
tben01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
117490686
Protein kinases [BR:
tben01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
117490686
CD molecules [BR:
tben04090
]
Proteins
117490686
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
ig
V-set
C2-set_2
Baculo_11_kDa
Orf78
Motif
Other DBs
NCBI-GeneID:
117490686
NCBI-ProteinID:
XP_033996356
LinkDB
All DBs
Position
Unknown
AA seq
1029 aa
AA seq
DB search
MASTRGRTGSLNLLHFLLGVFLVPSFLSLELLPSANQVLLNSSSNYSVVCSGWSQVTWLL
PAVPEGGVIQVEPLGSSSVLRLLNASWRDSGRYTCEEAGSPERRQVDVFIPGTGPEEWFV
PRLSGVVMQVGLEDTVPCGVSDPRLNVSLFERHSRTPVTTATYEPGRGFTGKLNDTSYTC
TATGGGAESQSQVYYVFSIVVPQQVEVYLSVSRSVLKVGESLMVNCTVRDIDMVFFTWDF
PRRQEVEPLTDFLPNQIRSFVNISSATVEDSGVYVCEVQETLQGQTAKKNVTITVLERGY
LLLWPSGETHLSALLHHTVTLSVEADAHPPPTVLWTKDNNTVATETSAVNTTHLTGSRYL
STLTLVGVRLHQTGSYTASVSNEDEAEEVVFNLEVKAPPRITSLSEVGSQEMLCVAEGAP
PPNITWYTCHSSHRCSNVTGGWRSKSAASEDNVTKDIGITTVRSVLSLQALTSVSAVRCE
ARNSAGRRTRDRHVQSSSLLSQVLVLAAVLVLVVIAIFFLIVLIVLWRKKPRYEARWKLM
ESVSPDGPQNILDLHSWEIPRNNVVLGQVLGSGAFGRVVEASVSDLIHSHSNTKVAVKMV
KQRSGVQSLVSELKVLMHIGPHLNLVNLLGACTRGGPVYLITEFCRHGDLVNYLQRNKHT
FLQSDTHTKSDGDGGYMDMTSETQYVTVKELSPAHIQPAEYEELCTPAGQQEAPQPLSAA
PPLSLMDLLSFSFQIAQAMDFLSSRNVVHRDLAARNVLVCEGKLLKVCDFSLARDLMKDQ
DYIARGTSFLPVRWMSPESLFQNLFSCQSDVWSYGVLLWELFSLGASPYPELPRTQDFCS
SLKTGNRMTRPEHAPLNMYDLMKVCWAESPQSRPSFSSLVVSVGNLLMEDYRKRYLQLTE
DFLSSPAVLRSRRSSPGADGGPTDAQKHGSPDAQVLEVGPEEAGSSHTTYIIPITDVTIE
TRGGAAQDAASPQLSQSQDTQEGTSPEDTQEGTSPEDTQEGTSPEDRQEGTSPEDRQEGT
SLEEEESSL
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaccagaggacgaacaggaagtttaaacctgctgcacttcctgttgggtgtg
ttcctggttccttccttcttgtctctggagctgcttccatcagccaatcaggttctgctc
aacagcagctccaactacagcgtggtctgttctgggtggagtcaggtgacctggctgtta
cctgcggtccctgagggaggggttattcaggtggagcctctggggtccagcagcgtcctg
cggctcctgaacgcctcatggagggattcaggtagatacacctgtgaggaggctgggtct
cctgagaggagacaggtggacgtcttcatacctggcacaggtccagaggagtggtttgtc
ccgaggctctcaggtgtggtgatgcaggtggggctggaggacaccgtcccctgcggtgtt
tctgacccccggctcaacgtctctctgttcgagcgtcacagcaggacccccgtcaccacg
gcaacatacgagccggggcggggcttcaccgggaaacttaacgacacgtcatacacctgc
actgccaccggggggggggcggagtcacagagccaggtgtactacgtgttcagcatcgta
gtccctcagcaggtggaggtgtacctgtctgtctctcgctcggtgctgaaggtgggtgag
tctctgatggtgaactgcacggtgagagacatcgacatggtgtttttcacctgggacttc
ccccgcagacaggaggtggagcctctgacagacttcctgcccaatcagattcgctccttt
gtgaacatctcctcggcaacagtggaagattcaggtgtgtatgtgtgtgaggttcaggag
acgttgcagggacaaactgcgaagaagaacgtcaccattacagtgctggagcgggggtat
ctgctgctctggccctcaggtgagactcacctgtcagccctccttcatcacacggtgacg
ctcagtgtggaggccgacgcccaccccccccccacagtcctctggaccaaagacaacaac
accgtcgccacggaaactagtgccgtcaacaccacacacctgacaggaagcaggtacctg
agcacgctcacgctggttggagtccggctgcatcagacaggaagttacacggcgagcgtt
tccaatgaagacgaagcagaggaggtcgtcttcaatctggaggtcaaagcaccccccagg
atcacgtctctgtcggaggtcggcagtcaggagatgctgtgtgtcgctgagggagctccg
ccccccaacatcacctggtacacctgtcacagctcacacaggtgcagtaatgtgactggc
ggttggaggagcaaatcagcagcctctgaggacaacgtcaccaaggacataggcatcacc
acggtgcgcagtgtgttgagtctgcaggctctcacctcagtgtcagctgttcgctgtgaa
gccagaaactctgcaggacgtcgaacaagagaccgccacgtccagtcctcctctctcctg
tctcaggtcctggttctggcagcagttctggttctggtcgtcatcgccatcttcttcctc
atcgtcctcatcgtcctctggagaaagaagccgcggtacgaggcccgctggaagctgatg
gagtcggtgagtccggacggaccgcagaacatcctggacctccacagctgggagataccc
cggaacaacgtagtactaggtcaggtgttgggttcaggggcattcggccgtgttgttgag
gcgagcgtctctgacctgattcactctcattctaacactaaagtggccgtcaagatggtg
aaacagcgcagtggggtccagtccctggtctcggagctgaaggtcctcatgcacatcggt
cctcacctgaacctggtcaacctgctgggagcgtgcacgagaggaggacctgtctatctg
atcactgagttctgtcgtcatggagacctggtgaactacctgcagaggaacaaacacacc
ttcctgcagagcgacacacacacaaagagtgatggtgatggaggctacatggatatgacc
tcagagactcagtacgtcaccgtgaaagagctaagccccgcccacatccagcctgcggag
tacgaggagctgtgcacccccgcaggccagcaggaggcaccgcaacccctcagcgccgcc
ccccccctcagcctcatggacctcctcagcttctccttccagatcgcccaggccatggac
ttcctgtcctccagaaacgtcgtccacagggacctggcagccaggaacgtcctggtctgt
gaggggaagctgctgaaggtctgtgacttcagtctggccagagacctgatgaaggaccag
gactacatcgccagagggaccagcttcctgcccgtcaggtggatgtctccggagagcctc
ttccagaacctgttcagctgtcagagcgacgtctggtcctacggggtcctgctgtgggag
ctcttctctctgggtgcgagtccgtaccccgagctgccgaggactcaggacttctgctcg
tctctgaagacaggaaacaggatgacccgccccgaacacgcccctctcaacatgtacgac
ctgatgaaggtgtgttgggcggagagtcctcagtccagaccctccttctcctcgctggtg
gtctcggtggggaacctgctgatggaggactacaggaagcgctacctgcagctgacggag
gacttcctgtccagtccggctgtgctcagatccagacggagttcaccgggagctgatggg
ggtccgacggacgctcagaaacatggaagccccgatgctcaggtattggaggtggggcca
gaggaggcaggctcctcccacacgacctacatcatccccatcactgacgtcaccatagaa
accagggggggggccgcgcaggacgcagccagccctcagctgtcccagtctcaggacaca
caggaggggacatcacctgaggacacacaggaggggacatcacctgaggacacacaggag
gggacatcacctgaggacagacaggaggggacatcacctgaggacagacaggaggggaca
tcacttgaggaagaggagagctctctgtga
DBGET
integrated database retrieval system
