Trematomus bernacchii (emerald rockcod): 117491078
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Entry
117491078 CDS
T09643
Symbol
scly
Name
(RefSeq) selenocysteine lyase isoform X1
KO
K01763
selenocysteine lyase [EC:
4.4.1.16
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben00450
Selenocompound metabolism
tben01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
117491078 (scly)
Enzymes [BR:
tben01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
117491078 (scly)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aminotran_5
BrxC_ab
Motif
Other DBs
NCBI-GeneID:
117491078
NCBI-ProteinID:
XP_033996818
LinkDB
All DBs
Position
Unknown
AA seq
440 aa
AA seq
DB search
MAKQYEDLGSLKGPAFTDHTFQHYSEMNLDRIYMDYNATTPLEPEVIQAISDALQDAWGN
PSSSYIAGAKAKAIINQSRENVARMVGGKAEDIIFTSGGTEANNLVLHTAVEHFRRSCRA
AEEGGGQQNGSSDLPHIITSNVEHDSVKLVAEHLQKEGKADVTYVPVSKVTARVEVEDIL
AAVRSNTCLVSIMLANNETGVIMPLPEICQRIKRLNRQRERLQILLHTDAAQAVGKIPVH
ACELGVDYLTIVGHKFYAPRIGALYVNGPGTRTPVYPMLFGGGQERNFRPGTENTPMIAG
LGKAADMVTCHLSDYQSHMLTTKLYLEERLKAIFKDKIHFNSHFPGSDVLPNTCNVSILG
PTLQGWRVLSSCRRLLASVGAACHSDSGNRPSHILLSCGVPSERAANALRLSVGRGTTKA
DVDAVVEDLRETVQLLEDML
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggccaaacaatatgaggacctcggctcgttaaagggtcccgccttcactgaccatacc
tttcaacattattcagaaatgaatctggacaggatctacatggactacaatgcaacaaca
ccactggaaccagaagtgatccaggccatttctgacgccctgcaggacgcctggggaaac
ccaagcagcagttatatagcaggtgctaaagccaaggcgataattaatcagtccagagag
aatgtggcgagaatggttggagggaaagctgaagacatcattttcacatcaggtggaaca
gaggccaataacctggtgctccacactgctgtggagcacttcaggaggagctgcagggct
gcagaggaagggggggggcagcagaatggaagcagcgacctccctcacatcatcacctct
aatgtggaacacgactcggtcaaactagtcgctgagcacctacagaaagagggcaaggcg
gatgtgacatatgtgcctgtgtccaaggtgacagcccgtgtggaggtggaggacattttg
gctgcggtgcgctccaacacttgtctcgtctcaatcatgctggccaacaatgagaccggg
gtcatcatgccactcccagagatctgccagaggataaagcgtctgaacaggcagcgtgag
cggctgcagatcctgctgcacaccgacgctgctcaggctgtgggcaaaatcccagtccat
gcctgtgaactgggagtggattacctcaccatagtgggacacaagttctatgcccctcgg
atcggtgctctgtatgtgaacggccctgggacgagaacccctgtgtatcccatgctgttt
ggaggaggacaggagaggaacttcagaccgggcacagaaaatacaccaatgattgctggt
ctgggaaaggctgcggatatggtgacctgtcatctgtctgattatcagagtcatatgcta
accaccaaactctacttggaagaacgactgaaggccatcttcaaagacaaaatccacttc
aacagccacttcccgggctctgatgtccttccaaacacatgtaacgtgtccatcctgggc
ccaacactacaaggctggagggtgctgtccagctgcaggaggctgctggccagcgttggg
gccgcctgccactcagacagtggaaacaggccttcccatatcctcctgagctgtggcgtc
ccctcagagcgggcagcgaacgccctgaggctgagcgtggggagggggaccaccaaggca
gatgtggatgcagttgtggaggacctgagggagactgtgcagctgctggaagacatgctc
tga
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