Trematomus bernacchii (emerald rockcod): 117491458
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Entry
117491458 CDS
T09643
Symbol
nr1h4
Name
(RefSeq) bile acid receptor isoform X1
KO
K08537
farnesoid X receptor
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117491458 (nr1h4)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tben03310
]
117491458 (nr1h4)
Transcription factors [BR:
tben03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
117491458 (nr1h4)
Nuclear receptors [BR:
tben03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
117491458 (nr1h4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Put_Phosphatase
PBP_dimer
Motif
Other DBs
NCBI-GeneID:
117491458
NCBI-ProteinID:
XP_033997341
LinkDB
All DBs
Position
Unknown
AA seq
492 aa
AA seq
DB search
MNEWVGPDFNVVGPLQIPPSDEFSISESSHLFDILADQGSPFLQDPDILPFTYPSTHYPS
MEPTMSSTPYYSSQNFYPQYNGDEWYSHTGIYELRKGPLEVGYDAEMEEVTAVVPAVCKR
TRHMSQAGRVKGEELCVVCGDKASGYHYNALTCEGCKGFFRRSITKNAVYKCKSGGNCEM
DMYMRRKCQECRLRKCKEMGMLAELKPSSPLAGLLTEIQCKSKRLRKNTKTSPGQSTGDE
TEAADNTDNKQVTSTTKLSKEKVEITKEQRALIKAILDAYNRHQIPQDVTKKLLQEQYSA
EENFLLLTEVATSQVQVLVEFTKNIPGFLSLDREDQIALLKGSAVEAMFLRSAQVLSKKM
PSGHIEVLEERIRKSGMSEEFMTPMFNFYKSIGELHMTQEEQAILTTITILTPDRPYVKS
HEAVERLQETMLDVLRKLCVLQHPQEPQYFARLLGRLTELRTLHHYHAEMLTSWKTNDHK
FTPLLCEIWDVQ
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagtgggtgggccccgactttaatgtggtgggaccgctgcaaatcccacccagc
gatgaattctccatctcagagagctcccacctctttgatattctggcagatcaaggcagt
cctttcctgcaggaccctgacatcttacccttcacctatcccagcacgcattatccctcc
atggagccgactatgtcttccacaccatactactccagtcagaacttctaccctcagtac
aacggagacgagtggtactcacacacagggatatatgaactaaggaaaggacccctggag
gtcggctatgatgctgagatggaggaggtgacggctgtagtgcctgctgtgtgcaagagg
acacgacacatgtcacaggcgggaagggtcaaaggggaggaactgtgtgtggtgtgtgga
gacaaggcctctggataccactataacgctctaacctgtgagggatgtaaaggtttcttc
agacgaagcataaccaagaatgctgtgtacaaatgcaagagtggcgggaactgtgagatg
gacatgtacatgcgcaggaaatgccaagagtgccggctaagaaagtgcaaagagatgggc
atgctggctgaattgaagccttcatcaccgctagcaggcctactgacggagatccagtgt
aagtctaaaaggctgcgaaagaacactaagacttccccgggacagtcgaccggagacgag
acagaagcagcggacaacacagacaacaaacaggtcacttcaaccaccaaactgtccaag
gagaaagtcgaaatcaccaaagagcagcgggcacttatcaaagccatcttagatgcttac
aaccgacatcaaattcctcaagatgtgaccaaaaaactgctgcaagaacagtacagtgca
gaggaaaacttcctcctgttgacagaggtggcaactagtcaagttcaagtactggtggag
tttacaaaaaatattccaggttttctctctctggatcgtgaggatcagatcgctctgctg
aagggctcggctgtggaggccatgttcctgcgctcagctcaggttctcagcaaaaagatg
cccagcggacacatagaggttttagaggagagaatacgcaagagtggtatgtcagaagaa
ttcatgacacccatgttcaacttttacaaaagcatcggagaactccacatgacacaggaa
gaacaggctatcctcaccacgataaccatcctgacaccagaccggccttacgtgaagagc
catgaggcggtggagagactccaggagaccatgctggacgtgctgaggaagctgtgtgtc
ctgcagcaccctcaggagccgcagtactttgcccgcctgctgggccgcctgacggagctg
agaacactacaccactaccacgcagagatgctcacctcctggaagaccaacgaccacaag
tttacgccgctgctctgtgagatctgggacgtgcagtga
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