Trematomus bernacchii (emerald rockcod): 117492572
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Entry
117492572 CDS
T09643
Symbol
pdgfab
Name
(RefSeq) platelet-derived growth factor alpha polypeptide b
KO
K04359
platelet-derived growth factor subunit A
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04010
MAPK signaling pathway
tben04020
Calcium signaling pathway
tben04510
Focal adhesion
tben04540
Gap junction
tben04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117492572 (pdgfab)
04020 Calcium signaling pathway
117492572 (pdgfab)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117492572 (pdgfab)
04540 Gap junction
117492572 (pdgfab)
09142 Cell motility
04810 Regulation of actin cytoskeleton
117492572 (pdgfab)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
tben04052
]
117492572 (pdgfab)
00536 Glycosaminoglycan binding proteins [BR:
tben00536
]
117492572 (pdgfab)
Cytokines and neuropeptides [BR:
tben04052
]
Cytokines
Growth factors (RTK binding)
117492572 (pdgfab)
Glycosaminoglycan binding proteins [BR:
tben00536
]
Heparan sulfate / Heparin
Growth factors/receptors
117492572 (pdgfab)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDGF_N
PDGF
Motif
Other DBs
NCBI-GeneID:
117492572
NCBI-ProteinID:
XP_033998783
LinkDB
All DBs
Position
Unknown
AA seq
208 aa
AA seq
DB search
MRPALCYFLLWTTYLLLASSEEVEFPQELIDRLSHSEIHSISDLQRLLDIESVGAGNNVI
EEPKHHKHHNPHKNYSRQHGYYNDLKSSQLHSRRKRSIAEEAVPAVCKTRTVIYEIPRSQ
VDSTSANFLIWPPCVEVKRCTGCCNTSNMRCHPSRKHHRTVKVAKVEYVRRKPKLKEVFV
RLEDHLECVCTSQHHVVEHSDAETVDVR
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgagacccgcactttgttacttcctgctgtggacgacgtacctgctgctggccagctct
gaggaagtggagtttccccaggagctgatagacagactgtcccacagtgaaatccacagc
atcagcgacctccagcggctactggacattgaatccgtaggtgcgggaaacaatgttatc
gaggagcccaagcaccacaagcaccacaacccccacaagaactactcccgtcaacatggt
tactacaatgacctgaagagctcccagcttcacagccgacgcaagaggagcattgcagag
gaggcggtcccggcggtgtgtaagacgcggacagtgatctacgagatccccaggagtcag
gtggattccacgtctgccaacttcctgatatggccgccctgtgtggaggtgaagcgctgc
acaggctgctgcaacacaagcaacatgcgctgtcacccttcccgcaagcaccaccgcacc
gttaaggtagcaaaggtggagtacgtgaggaggaaacccaagctgaaagaggtctttgtg
cggttagaagaccatctggaatgtgtgtgcacgtcgcaacatcacgttgtggagcactca
gatgcagaaacagtggacgtgaggtga
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