KEGG   Trematomus bernacchii (emerald rockcod): 117492884
Entry
117492884         CDS       T09643                                 
Symbol
rbx1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
tben  Trematomus bernacchii (emerald rockcod)
Pathway
tben03420  Nucleotide excision repair
tben04110  Cell cycle
tben04114  Oocyte meiosis
tben04120  Ubiquitin mediated proteolysis
tben04141  Protein processing in endoplasmic reticulum
tben04310  Wnt signaling pathway
tben04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:tben00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    117492884 (rbx1)
   04120 Ubiquitin mediated proteolysis
    117492884 (rbx1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    117492884 (rbx1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    117492884 (rbx1)
   04350 TGF-beta signaling pathway
    117492884 (rbx1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    117492884 (rbx1)
   04114 Oocyte meiosis
    117492884 (rbx1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tben04121]
    117492884 (rbx1)
   03400 DNA repair and recombination proteins [BR:tben03400]
    117492884 (rbx1)
Enzymes [BR:tben01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     117492884 (rbx1)
Ubiquitin system [BR:tben04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   117492884 (rbx1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     117492884 (rbx1)
   Cul2 complex
     117492884 (rbx1)
   Cul3 complex
     117492884 (rbx1)
   Cul4 complex
     117492884 (rbx1)
   Cul7 complex
     117492884 (rbx1)
   Cul8 complex
     117492884 (rbx1)
   Cul9 complex
     117492884 (rbx1)
DNA repair and recombination proteins [BR:tben03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      117492884 (rbx1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      117492884 (rbx1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 DUF8003 PHD_NSD
Other DBs
NCBI-GeneID: 117492884
NCBI-ProteinID: XP_033999196
LinkDB
Position
Unknown
AA seq 108 aa
MAAAMDVDTPTGTNSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcagcagctatggatgttgatacgccgaccggcactaacagtggggctagcaagaag
cgatttgaagtaaaaaagtggaatgcagttgcgctgtgggcctgggacattgtggtggat
aactgtgccatctgtaggaaccacatcatggatctctgtatagagtgccaggccaaccaa
gcttcagcaacttctgaggagtgcactgtagcctggggtgtctgcaatcatgctttccat
ttccactgtatttcccgctggctgaaaaccagacaggtgtgccctctggacaacagggag
tgggagtttcagaaatacggacactag

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