Trematomus bernacchii (emerald rockcod): 117494061
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Entry
117494061 CDS
T09643
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tben04812
]
117494061
Cytoskeleton proteins [BR:
tben04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
117494061
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT
Atx10homo_assoc
LRR_14
DUF5732
LTN1_E3_ligase_6th
Motif
Other DBs
NCBI-GeneID:
117494061
NCBI-ProteinID:
XP_034000622
LinkDB
All DBs
Position
Unknown
AA seq
732 aa
AA seq
DB search
MMAPEPLRSAMNIRCVEDTSLAVPSDTKLHSGQQRVLDQVHTIKRSKSKPGKNGTLSPPA
LSPLPQNMSTYEFGTFKFSPSKANGFFSRTNSSQSTAKVGHTTKSRTLSAKTSKGQHYSS
GGWEQNNFATRSQTLTPNGMRSARSDPALARPFGAAPTGGTVMRAKGQAVQNNIMQNRVN
RQSVYSTTSNHQMNSNHQTNSNPHMNSNHQMTNSQTHIVQQPSMHSMTDGRMGTIKRSNI
EQISAVNSSVNMSDMTLKQAIEFLSHSDENYQQCGATFIQHTTYKEESTKQDVLKMGGIP
ALVTLLRSANPGVSQAAAGALRNLVFKDQANKLEVQHCGGIAKALQLLKESDSTETQKQI
TGLLWNLSSADELKEEMISTALPALTENVVEPFTCWSDKSTNNNIHPDVFYSATGCLRNL
SSGKKKDREAMRDCSGLINSIMSYIQSCVAEDNPDDKSVENCACILHNLTYQLEEESPGC
YSKFQPAGRKGSAVGCFSPKSSKAQKEISLDAVRGMPEESTPTGVNWLCHPKAMQTYMSL
LGSSQKDATLEACCGALQNLTALKGAGSSSMSQLMVQKLGALMHLRPLLKSPSPGLQKTA
MSLLGNMSRTSSLQTSMAKQILPDITSLLSSTPKEMGNSDDTITSACNTACNLMIADSEV
SKKVVDQSLVLAMADLSKNASFPKGSRAASMLLHTLWSDKNLQGVVKKLGLDKSLFVNDY
ITSVQKSMQLSE
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgatggctccggaaccgctgcgttcagctatgaatatccgatgcgtggaggacacttcg
cttgcggtgccctccgacaccaagctgcactcaggacagcagcgcgtgctggatcaagtg
cacaccatcaagagaagcaagtcaaaacctgggaagaacggcacattgtcccccccagct
ctaagcccattaccgcagaatatgtcaacatatgagtttggaaccttcaagttttctccg
tccaaagcaaatgggttcttcagtcgcaccaactccagtcagtcaacagccaaagtggga
catactacaaagagtcgcactctatctgctaaaacctccaaaggacaacattacagctca
ggtggatgggaacagaacaactttgccacccggtcccagaccctgacccccaatgggatg
agatccgctcgcagtgacccggccttggctcgtccatttggtgctgctcctacaggcgga
actgttatgagagccaaagggcaggcggtccagaacaacatcatgcagaatcgagtcaat
agacaaagcgtctactctacgaccagtaaccaccagatgaacagtaaccaccagacgaac
agtaacccccatatgaacagtaaccaccagatgaccaacagccagacacacatcgtccag
cagccctccatgcactctatgaccgacggcaggatgggaaccatcaaaaggtccaacata
gagcagatatcagcggtgaacagctcggtgaacatgtcagatatgaccctgaagcaggca
atcgagttcctgtctcactcggatgagaattaccagcaatgtggagccaccttcattcaa
cacaccacctacaaagaggagagcaccaaacaggacgttttaaaaatgggaggtatcccg
gctcttgtgaccctgctgcggagcgccaaccctggggtgagccaggctgctgctggcgct
ctgaggaacctggtgttcaaagaccaggccaacaagctggaggttcagcactgtggcggg
atcgctaaggccctgcagctgctgaaggagtcagactctactgagacgcagaaacaaata
actggactgctctggaacctgtcctctgccgacgagctgaaggaagagatgatttctaca
gcgctgcccgccctgacagagaacgtggtggaacctttcacctgctggtcagacaaaagc
accaacaacaacatccaccctgatgtcttctacagcgccacagggtgcctgcggaacctg
agctccggcaaaaagaaggacagagaggcaatgagagattgcagtggcctaatcaactcc
atcatgagttacatccagtcctgtgtggcagaggacaaccctgatgacaagtctgtggag
aactgtgcatgcatcctccataacttgacctaccagctggaggaagagtcccctgggtgc
tacagcaagttccaacctgcggggaggaaaggctctgcagttggatgcttcagccccaag
agcagcaaggcccaaaaggagatttcacttgacgcggtacgggggatgccggaggagagc
accccgacaggtgtgaactggttgtgccaccccaaagccatgcagacctatatgtctctg
ctgggctcgtcccagaaagatgccaccctggaagcctgctgcggggccctgcagaacctc
actgccttaaagggagcggggtccagttccatgagtcagttaatggttcaaaagctgggg
gctctcatgcaccttcgaccccttttaaaatctcccagcccgggcctgcagaagactgcc
atgtctctgctgggtaacatgtctcggaccagcagtttgcagacctccatggcaaagcag
atcctgcctgacatcaccagcctcctctcctctacccctaaagagatgggaaactccgac
gacaccataacatcagcttgcaacacagcatgcaatctgatgattgcggacagtgaggtc
agcaagaaagtcgtcgatcaaagtctggtgttagccatggccgacctcagcaagaacgcg
tctttcccaaaaggcagcagagccgcttcgatgttgctccacaccttatggagcgataag
aatttgcaaggtgtcgtgaaaaagctggggctggacaaatcactttttgtcaatgactac
atcacttcagtgcagaagtccatgcagctctctgagtga
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