Trematomus bernacchii (emerald rockcod): 117494130
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Entry
117494130 CDS
T09643
Symbol
itchb
Name
(RefSeq) itchy E3 ubiquitin protein ligase b isoform X1
KO
K05632
E3 ubiquitin-protein ligase Itchy [EC:
2.3.2.26
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04120
Ubiquitin mediated proteolysis
tben04144
Endocytosis
tben04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117494130 (itchb)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117494130 (itchb)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117494130 (itchb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117494130 (itchb)
04121 Ubiquitin system [BR:
tben04121
]
117494130 (itchb)
Enzymes [BR:
tben01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
117494130 (itchb)
Membrane trafficking [BR:
tben04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
117494130 (itchb)
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
HECT type E3
117494130 (itchb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
117494130
NCBI-ProteinID:
XP_034000735
LinkDB
All DBs
Position
Unknown
AA seq
956 aa
AA seq
DB search
MASGVTKPGPSNGHPMKAQLQIVVLSAKLKENKKNWFGPSPYVEVTVDGQSKKTEKCNNT
HSPKWKQPLTVIVTPFSKLVFRVWSHQTLKSDVLLGMATLNVSDTLKSNEMKISEVVQTL
QLCADRDQSDVVGDLSVCLDGMTVDPEMFATAEADHHSTSNGDSQPNGDHVTRRSRDSSP
AVSVDGVEHRSSPSGRRSVHSAGSPSVSSGGSRPLRPPRPSRPPPPTPRRPASSPASSSN
GSATADGSDGQSGSDTPVRTPASGPSPASGPSPASGPSPASGPSPAPGPSPAPGSSPSAG
SERNSTAAPSYGAAAYSSGAAAPSSGAAASSAGAAASSAGAAASSAGAAASSSGGAAPRQ
PASSVTPAVTPSVPAVSTGPLPPGWEQRVDQNGRVYFVDHVEKRTAWERPEPLPPGWERR
VDQMGRVYFVDHMTRTTTWQRPTMETVRNYEQWQHQRSQLQGAMQQFNQRFIFGLQEQVS
ATQNKEFDPLGPLPHGWEKRTDSTGRVYFVHHPTRATQWEDPRTQGLLNDKPLPEGWEMR
FTVDGIPYFVDHNRRATTYIDPRTGKSSLENGPQITYVRDFKAKVQYFRFWCQQLSMPQH
IKISVTRKTLFEDSFQQIMSFNAQDLRRRLWIIFPGEEGLDYGGVAREWFFLLSHEVLNP
MYCLFEYAGKDNYCLQINPASYINPDHLKYFKFIGRFIAMALFHGKFIDTGFSLPFYKRM
LNKPLALKDLESIDPEFYNSLMWIKDNNIEECGLEMFFSVDKEILGEISTHELKPDGGEL
QVTEENKEEYIRLVAEWRLSRGVEEQTQAFFEGFNEVLPQQYLQYFDAKELEVMLCGMQE
IDLADWQKNTIYRHYARSSKQIVWFWQFIKEADNEKRMRLLQFVTGTCRLPVGGFADLMG
SNGPQKFCIEKVGKENWLPRSHTCFNRLDLPPYKSYEQMKEKLLFAIEETEGFGQE
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtggagtcaccaagccgggcccttccaacggtcaccctatgaaggcacagcta
caaatcgttgtgctatctgcaaagctaaaagagaacaagaaaaactggttcggccccagt
ccctatgtggaagtgacagtcgacggccagtccaagaaaactgagaaatgcaacaacacc
cacagccccaaatggaagcagccgctcactgtgattgtgactccgttcagcaaactggtg
ttccgtgtgtggagccaccagaccctgaagtccgacgtgttgctgggcatggccacactg
aacgtcagtgacacgctcaagtctaacgaaatgaaaatttctgaggtggtgcagacctta
cagctgtgtgcagacagagaccagtccgatgtggtgggagacctctccgtctgcctggac
ggaatgactgtcgaccccgagatgttcgccacggcagaggccgaccatcacagtacatca
aacggggattcccaacccaacggggatcatgtcacaaggcggagtcgagacagctcccct
gctgtgagcgtggacggcgtcgagcacaggtcttctcccagcggacggaggtcggtgcac
agcgcggggtctccctctgtgtcctcagggggctcgaggcctctacgacccccccggccc
tccagacctcctcctccaaccccgcgcagacccgcctcttcaccagcatcttctagtaat
ggctctgcaacagctgacggcagtgacggtcagtcgggttctgacacaccggttcgaacc
ccggcttcaggaccttcaccggcctcaggaccctcaccggcctcaggaccgtcacctgcc
tcaggaccctcacctgccccaggaccctcaccggcccctggatcgagtccatcggcgggc
tcggagaggaactcaacagcggcccccagctacggggccgctgcctacagctccggggct
gctgcccccagctccggggctgcggcctccagcgccggggcagcggcctccagcgccggg
gcagcggcctccagtgccggggcagcggcctccagctccgggggtgcggcccccagacag
ccggccagcagcgtcacccctgctgtcactccgagtgtccccgctgtcagcaccgggccc
ctgcccccagggtgggagcagagggtggatcagaacggcagggtgtattttgtcgatcac
gtggaaaagagaacggcgtgggaacgccctgaaccactgccccctggctgggagcgtcgt
gtcgaccagatggggcgggtctactttgtcgatcacatgacccggaccaccacgtggcag
cgccccaccatggagacggtgcgtaactatgagcagtggcagcaccagcgcagccagctg
cagggggccatgcagcagttcaaccagaggttcatattcgggctacaagagcaggtctca
gccactcagaataaggagtttgatcctctcgggcctctgccacacggatgggagaagaga
acagactccactggcagagtttattttgtacatcaccctacgcgagcaacacagtgggag
gacccacgaacacagggtttgctgaatgacaagcctctccctgagggctgggagatgagg
ttcactgtagacggtattccctacttcgtggaccacaacaggagagcgaccacgtacatc
gaccctcgcactggaaagtcctcacttgaaaacggacctcagatcacctacgttcgagac
tttaaagccaaagtacagtacttcagattctggtgccagcaactgtcaatgcctcaacac
atcaagatcagcgtaaccaggaaaaccctgtttgaggactccttccagcagattatgagc
ttcaacgctcaagatctgcgaaggagactttggatcatcttccctggagaagaaggcctc
gactacggaggcgttgccagggagtggttcttcctgttgtcccatgaagttttgaacccc
atgtactgcctgtttgaatatgccggcaaagataactactgtctccagattaaccccgcc
tcctacatcaaccctgaccacctcaagtatttcaagttcatcggacgcttcattgccatg
gctcttttccacggcaaattcatcgacactggtttctcactgccattctacaagcgcatg
ctcaacaagcccctggccctcaaagacctggagtcgatcgacccggagttttacaactcg
ctcatgtggatcaaggataacaacatcgaggagtgcgggctggagatgttcttctccgtg
gacaaagagatcctgggggaaatctccacccatgagctgaagccagacggaggagagctc
caggtgacggaggagaacaaggaggagtacatcaggctggtagcagagtggaggctgtcc
cgaggggtggaggagcagactcaggctttctttgaaggcttcaacgaggtcctccctcag
cagtacctgcagtacttcgatgctaaagagctcgaggtgatgctgtgtggtatgcaggag
atcgacctggcagactggcagaaaaacaccatctacagacactacgctcgcagcagcaaa
cagatcgtctggttctggcagttcataaaggaggcggacaacgagaagaggatgaggctg
ctgcagtttgtcacaggaacctgtcgcctgcctgtcggaggctttgccgaccttatggga
agcaatggtccccagaagttctgtatcgagaaggtgggaaaagaaaactggcttcccaga
agtcacacgtgcttcaacagactggacttgccgccatacaagagctacgagcaaatgaag
gagaagctgctgtttgccatcgaggagacggaaggcttcggacaggagtga
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integrated database retrieval system
