Trematomus bernacchii (emerald rockcod): 117494293
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Entry
117494293 CDS
T09643
Symbol
si:ch211-112c15.8
Name
(RefSeq) tumor necrosis factor receptor superfamily member 1A
KO
K03158
tumor necrosis factor receptor superfamily member 1A
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04010
MAPK signaling pathway
tben04060
Cytokine-cytokine receptor interaction
tben04150
mTOR signaling pathway
tben04210
Apoptosis
tben04217
Necroptosis
tben04920
Adipocytokine signaling pathway
tben05132
Salmonella infection
tben05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117494293 (si:ch211-112c15.8)
04150 mTOR signaling pathway
117494293 (si:ch211-112c15.8)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
117494293 (si:ch211-112c15.8)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
117494293 (si:ch211-112c15.8)
04217 Necroptosis
117494293 (si:ch211-112c15.8)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
117494293 (si:ch211-112c15.8)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117494293 (si:ch211-112c15.8)
09171 Infectious disease: bacterial
05132 Salmonella infection
117494293 (si:ch211-112c15.8)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
tben04050
]
117494293 (si:ch211-112c15.8)
04090 CD molecules [BR:
tben04090
]
117494293 (si:ch211-112c15.8)
Cytokine receptors [BR:
tben04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
117494293 (si:ch211-112c15.8)
CD molecules [BR:
tben04090
]
Proteins
117494293 (si:ch211-112c15.8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Death
TNFR_c6
DDHD
Motif
Other DBs
NCBI-GeneID:
117494293
NCBI-ProteinID:
XP_034001026
LinkDB
All DBs
Position
Unknown
AA seq
453 aa
AA seq
DB search
MNFVLVFPLILIFLFIGQSYTEVKTQHSDSCFIICPAGYYKVGPCEGKAVGYRCEKCGYG
TYTAITNFVSECRRCQSCGYYQFEANPCTFTSDTLCEDCKCEQCKGLNNNRECKSCQSEK
CLQLPKCKRICKTTTATTTASTTANTTATTTASTTATTTATTTATTTANTPTTTTATTTA
TTTANTTASTTATTTASTTANTTASTTANTTASTTATTTASTTATTTASTTSLSNDTPNP
NVIPVPPNPLNAFQWLLLTGVVVPFLGLLWFVLFIKNPFQCLCWRAKNDLVPPVEDAILN
ERGSHQGSSPHTLTLHISEETPMMTLSQSAATPEHPAHIRPLLPDGEHKVIKQIEQTEHW
PAIVLYAIIKEVPLRRWKEFLRLLSVADQQMERVELEAGLGLGSMEKQYQMLRLWSQHSS
GCLNDVFSALHYMDLSGCAQLLQENLDKLQWKP
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaactttgttttggtgttcccactgatactcatcttcctattcatcggacagagttac
accgaggttaaaacccaacattcagattcatgttttataatatgcccagccggatattat
aaagttggtccatgcgaagggaaagctgtagggtacagatgtgaaaagtgtggttatggc
acatacacagcaataaccaactttgtaagcgaatgtaggcgttgtcagagttgtggatat
tatcagtttgaagctaatccatgcacctttactagtgatacgctgtgcgaggattgcaaa
tgtgaacaatgcaaaggactgaacaacaacagggagtgcaagtcctgccaaagcgagaag
tgtttgcaattaccaaaatgcaagaggatatgtaaaactacaactgcaaccacaactgca
tctacaactgcaaacacaactgcaaccacaactgcatctacaactgcaaccacaactgca
accacaactgcaaccacaactgcaaacacacctacaaccacaactgcaaccacaactgca
accacaactgcaaacacaactgcatctacaactgcaaccacaacagcatctacaactgca
aacacaacagcatctacaactgcaaacacaactgcatctacaactgcaaccacaacagca
tctacaactgcaaccacaacagcatctacaacttcactttcaaatgacactccaaatcct
aatgtgatcccagttccaccgaatcccttgaatgcatttcagtggcttttgctcactggg
gttgtggtgccgtttctgggcttactgtggttcgtgcttttcattaagaatccattccaa
tgtctctgctggagagcgaaaaatgacctggtgccccctgtcgaagatgccatattgaat
gaacgaggcagtcatcaaggcagcagcccgcacacactgacattacacatatctgaggaa
actcccatgatgactctcagtcagagtgcagccacaccagaacatccagcccacatcagg
cctctcctaccagacggtgaacacaaagttatcaaacaaatcgagcaaactgagcactgg
ccggccatcgtcctctatgccatcatcaaggaggtgcccctgcgtaggtggaaagagttc
ttgcgtctgctctcggtggcggatcagcagatggagcgggtggagctggaggctggtttg
ggtctgggctccatggagaagcagtaccagatgctgaggctgtggagccagcactcctct
ggctgcctgaatgatgtcttctcggccctgcactacatggatttatctggctgtgcccag
ctactgcaggaaaacctggacaagctgcagtggaaaccttaa
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