Trematomus bernacchii (emerald rockcod): 117494722
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Entry
117494722 CDS
T09643
Symbol
cd4-1
Name
(RefSeq) LOW QUALITY PROTEIN: CD4-1 molecule
KO
K06454
T-cell surface glycoprotein CD4
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03250
Viral life cycle - HIV-1
tben03260
Virion - Human immunodeficiency virus
tben04060
Cytokine-cytokine receptor interaction
tben04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
117494722 (cd4-1)
03260 Virion - Human immunodeficiency virus
117494722 (cd4-1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
117494722 (cd4-1)
04514 Cell adhesion molecules
117494722 (cd4-1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
tben04090
]
117494722 (cd4-1)
CD molecules [BR:
tben04090
]
Proteins
117494722 (cd4-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
ig
Ig_2
V-set
C2-set
Orf78
DPM3
DUF6249
Motif
Other DBs
NCBI-GeneID:
117494722
NCBI-ProteinID:
XP_034001560
LinkDB
All DBs
Position
Unknown
AA seq
460 aa
AA seq
DB search
MKIFILLLLLLAVLTSTTGAVEVVYAQIGGTVTLKPPAKYXSTIICTGKKDKDSPKNLAM
LNPMGNSNWKIQDEAWKNISSWSPLIIKNIQQEHFRSFFLKVMVSGGKPDFYEYEIRKLT
VWTPSSPVLPGEKVTLSCSAATPPWVKKIQWMNPRGETNPQNPFTFSASMRDNGPWSCMV
TDGQSKSQVNVSVTVLDLSPAVSPQYTSTSSRLTVPCSFLPHISWEQIKAKGFRELHWSF
IPTPVSVPQRXFSLSAEGLLTWKPDQNKGLLQPGTSLKKGDLSLKRNQGIEKDAGEYICA
XGFENGVTLERRVHVKLLQIVSSTGTALISGQQLNLTCGLEQPLPSDLHLKWLPPKQSTL
SDPRPSSPLIIPKVNTADAGKWRCELWQNNIQLTSAEITLEIVPWLSVWMLVVICSITVI
IILVFILAFILCRRRQQKMRHLRRRLCQCKHPKPKGFYRT
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcttcatcctcctcctcctcctcctcgctgtgctcacctcaactacaggggca
gtggaggtggtttatgctcaaatcgggggcacggtgaccctgaagcctccggccaagtat
taaagcaccattatatgtactgggaagaaggataaagatagccctaagaaccttgccatg
ctaaatccaatgggcaacagcaattggaaaattcaagatgaagcctggaaaaacatctcg
tcgtggtctcccctgatcatcaagaacatccagcaggaacacttcaggagtttcttcctt
aaagtaatggtatctggtggcaagccggacttctatgagtatgaaatacgcaaactaaca
gtgtggaccccctcctctcctgtgttgccgggggaaaaggtgactctgtcctgcagtgct
gcgacccccccctgggtaaaaaagattcaatggatgaacccccgaggagagacaaacccc
caaaatccattcaccttcagcgcctcgatgcgggacaacgggccgtggagctgcatggtg
acggacggtcagagcaagagccaggtcaacgtctctgttacagttctggacctctcccca
gctgtctcccctcagtatacgtctacatccagtcgtctcacagtgccctgctcctttctt
cctcacatctcctgggaacaaatcaaagctaaaggcttcagggaacttcactggagtttc
atccccacaccagtctctgttcctcagaggnctttctccctctctgcggagggtctactc
acctggaagccagaccaaaacaaaggactgctgcagcccggaaccagcctgaagaaagga
gatctgtctctgaaaagaaaccaagggatagagaaagacgcaggagaatatatttgtgcc
nctgggtttgaaaatggagtgactctggagaggagggtgcacgtaaagctgctgcaaatc
gtctcctctacaggaacagcgctgatctcaggccagcagctcaacctgacctgcggcctc
gagcagccgctgccctctgacctgcatctgaaatggttgccgcccaaacaatcgaccctc
tccgacccccggccctcctctcctctcatcatcccgaaggtgaacacagcagacgcagga
aagtggaggtgtgagctgtggcagaacaacatacagctgacgtcggctgagataacgctg
gagatcgtgccctggctgagtgtgtggatgctggtggtcatatgcagcatcaccgtcatc
ataatcctcgtcttcatcctcgccttcatcctctgccgacgcagacaacagaagatgaga
cacctcaggcgtcgactctgccaatgcaaacaccccaagcccaaaggattttacagaaca
taa
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