Trematomus bernacchii (emerald rockcod): 117495186
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Entry
117495186 CDS
T09643
Symbol
fyco1a
Name
(RefSeq) FYVE and coiled-coil domain-containing protein 1
KO
K21954
FYVE and coiled-coil domain-containing protein 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117495186 (fyco1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117495186 (fyco1a)
Membrane trafficking [BR:
tben04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
117495186 (fyco1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FYVE
RUN
GOLD_2
DUF4200
Motif
Other DBs
NCBI-GeneID:
117495186
NCBI-ProteinID:
XP_034002197
LinkDB
All DBs
Position
Unknown
AA seq
1499 aa
AA seq
DB search
MAAGATVGESQLQRIIRDLHDAVAELAKEYRESGEPITDDSTNLHKLSYKLEYLLQFDQK
EKTTFLGTKKDYWEYFTDCLAKIKGANDGIRFVKSIPELKTSLGKGRAFIRYSLVHQRLA
DTLQQCLMNQRITSDWYYARSPFLKPHLSVDIINHLYELNEVQFDVASRGHDLDASWPTF
ARRTLGNSPGHMWKPPTRSSSMNSLASTYSQQAHEFPSSPDYGQNLLNDLNESCTEEAST
AEDLRLELDQSELKQRGLLEKVQQLGEEAAELRDVVVQLQSQLDVSLAAQEEQQGLQGDL
NALQGREEALSREVEALRTGGKAEQQLLQEKLASAEGKNIELLAKLDGVLSEKGQQATSH
FDSAQKIHELLDRLKEAERGKMDAVAEADEKKRQAERLEDELTLKEAAATRGETKLEALV
TSASEEKATLEVKVEEQCSALDKLQGALTVREKETSNFQRQLQDLQRSLEEKEKDMEEVK
ERAQQDKEDMQKKSNGLGSEVTALKEKLKEKDAELSSNCKKLQQLESKHQSLITERGKLT
NNLVELEGNVKEQSAKIEEYKTQCGNLIELNKKLLKTEKRNEGMKKEMVENRKVTETELA
ALRASEKQLRGQMDDTKMTVDEKEKHLREENRQLDESLQRANMAAKLSEATAKHLEQENQ
TVREEQDTVKAALSRMQADLRSVHAQIGELEKNLGVSRKNETSLQEQLEAKDAQLEHEEK
SLVELQSRLESLETREKELEIAKSDAEATCAKQTELIERVTSEKRVMETSQLERSAVQVK
ENQEETGKLEGRLEVCMNDVSRLQAEILDLRVRVQRSEEEKMKSQAQLEVTEAQRDELRT
LTEHLKAQTEALNQKHVTELVDCKKKEGVLIEQRDKEVAACAELSISAAATREELSKLKA
ENSRLSSENGEIREGLHRANTEMAELGITICKLGAEKEEAREHWAGDAARIQEMEKEVER
LEESMAELQRENARLREELTEKEKLPESIMELKKQLDNAKNQVQSAKEEVGAAKFHLSSE
SMSHQVQMKSVNEQLDTVRGQLQEETRSVSSLQDKVSEIEALNGQYLNLTGEKDAHITQT
ETTIRESESEIQQLRDSVTSAEEAHLAAQKLCEDLRQKLITTEADRANQSMKMTAEIDDL
NRTKGNLGERLIELIRDKDALWQKSDALEFEQKMRAEEHWWSDKETTNCLDCKGQFTWWL
RRHHCRLCGRIFCYYCSNNFVLTKHSGKKERCCRDCYNQHSAVVERFTEAELSPSDTQPP
PPGAGPQPPPEPAPYKPTPRVTVSDPSPKSDDGVFDIITEEEVNGVYDSDNVSQTTGGSL
EGDQEPRPPGALDIGTGDVTPDDPEDHVPTVQDTEINILKSGEVTMAVPLTIDDISGFGE
GSRELFIKSSCYSVITVAVGDRGPTISWVFSSEPKSISFSVVYRESADVHVEQSKVLIPL
TRCNSHKETIQGQLKVRNPGLYTLIFDNSYSRFISKKVFYHLTMERPIIYDGSDSPEHG
NT seq
4500 nt
NT seq
+upstream
nt +downstream
nt
atggctgctggggcgacagtcggggagagccaactacagaggattatcagagatctgcac
gatgctgttgcagagcttgcaaaagagtacagggaaagtggggagccaatcaccgatgac
agtaccaacctgcacaagttatcctacaaactggaatacttactacagtttgaccagaag
gagaagaccacatttcttggtacaaagaaggattattgggagtacttcactgactgcctg
gccaaaatcaaaggagccaatgatgggatccgctttgtcaaatccatccctgagctgaag
acatctctggggaaaggacgggcgtttatccgttactccctcgtacatcagcggctggcc
gacactctgcagcagtgcctgatgaaccagagaatcaccagtgactggtattatgcacgg
agccccttcttgaagccccatctgagtgttgacataatcaatcacttgtacgagctcaat
gaggtccagtttgatgtggcttccagaggtcacgatcttgatgcctcctggccaactttt
gcaaggaggacactgggaaactcacctggccacatgtggaaaccacccactcgcagttcc
agtatgaacagtctggccagcacctactcccagcaagcccacgagttcccctccagccct
gactatggtcagaatctgctcaatgacctgaacgaatcctgcacagaagaggccagcaca
gctgaagaccttcgcctggagctggaccaatcagagctgaagcagcgagggctcctagag
aaagtgcagcagctgggcgaggaggctgctgagctcagggatgtagtggtgcagctccag
agtcagctggatgtgtccctcgctgcccaagaggagcaacagggcttgcagggagatctg
aatgctctgcagggaagagaagaggccctttccagagaagtggaagcactcaggactggg
ggaaaagctgaacaacaactgctccaggaaaagctggcatctgctgaggggaagaacata
gagctcctagccaaattagacggggtgctgagtgaaaagggccagcaggcaaccagccac
tttgattcagctcaaaagatccatgagttactggacagattgaaggaggcagagagaggg
aagatggatgctgtagctgaggcagatgagaagaagagacaggcagaaaggctagaggac
gagctgacactgaaggaagcagcagcaacgcgtggcgaaacaaaactagaagcattggta
acatctgcatctgaggagaaggcaacgttggaggtgaaagtggaggaacagtgcagcgct
cttgataagctgcagggggctttgacagtgagagagaaggagacaagcaacttccaaaga
caactgcaggacctccaaagatccctagaggagaaggagaaagacatggaggaggtgaag
gagagggcacaacaagataaagaggacatgcagaagaagtctaatggtttaggatcagaa
gtcactgcccttaaggagaagctaaaggagaaagacgcagagctttcctccaactgcaag
aaactacaacagctagaatccaagcaccaaagcctgatcacagagagaggcaaactgacc
aataaccttgttgaactggagggtaacgtcaaagaacaatcagcgaagatagaagaatac
aagactcagtgtggcaatttaatagagctaaacaagaaattgctaaaaacagaaaagaga
aacgaggggatgaagaaggagatggtagaaaacagaaaagtgaccgagactgaattagct
gctctgagagcttctgagaaacagcttcgtggccagatggacgacaccaagatgacggtg
gatgaaaaggagaagcatctgcgtgaggagaaccgccagctggatgagagtctgcagaga
gccaacatggccgcaaagctctcagaggccacggcaaagcatctggagcaggagaaccag
actgtgagagaggagcaggacactgtgaaagcagctctcagccgtatgcaagccgacctg
aggagtgttcacgcgcagatcggagagttggagaaaaacttaggagtctcgcgtaagaac
gaaaccagccttcaagaacagctcgaagccaaagacgcgcaactagaacatgaagagaag
agtcttgttgagctgcagtccaggttggaatctcttgaaaccagggagaaggagctggag
atcgccaagtctgacgcagaagcaacttgtgctaaacagacagaattgattgaaagggtt
acctcggagaagcgagtgatggagacatctcagctggagagaagcgcggtgcaagtgaag
gagaaccaggaagagacggggaaacttgaaggccgattggaggtgtgcatgaatgacgtg
tccaggctgcaggcagagatcctggacctcagggtgcgggtacagagatctgaggaagaa
aaaatgaaatcacaagcacaactggaggtgacggaggcccagagagatgagctccggact
ctgaccgagcatctcaaagcccagactgaggcactgaatcaaaagcatgtaacagagctc
gtggactgcaagaagaaagagggagttctcattgaacagcgtgataaagaagtagccgcc
tgtgcagagttgtccatctctgcagcggccacccgcgaagagctgtccaaactcaaggca
gaaaacagcaggctatcctcagagaacggcgagatacgagagggtctacacagagcgaac
actgagatggcagagcttgggatcaccatctgtaagctgggtgcagaaaaggaggaggct
agagagcactgggccggggacgccgccaggatccaggagatggagaaagaggtggagcga
ctagaagagagcatggcagaactgcagagggagaatgccagactgagagaggagctgaca
gagaaggagaaacttccagagagtatcatggagctcaagaagcagctggacaacgccaaa
aaccaagtgcagagcgccaaggaggaggtgggggccgccaagttccacctgagctctgag
agcatgagtcatcaggtccagatgaagagcgttaatgagcagctggacacggtgagaggt
cagctgcaggaggagacgaggagtgtgtccagcctgcaggacaaagtgtctgagatagag
gctttgaatgggcagtacctgaacctaactggcgagaaagacgctcacatcacacagaca
gaaacaaccatccgtgagagtgagagcgagattcagcagctgagggattctgtaaccagc
gctgaagaagcacacttggctgcgcaaaagctctgcgaggatttgaggcagaaactcatc
acaacagaagctgacagagcaaaccagagcatgaagatgactgcagagatcgatgacctc
aacaggacgaagggcaaccttggagagcggctcatcgagctgataagggacaaagatgct
ctgtggcagaagtcagacgctctggagtttgagcagaaaatgcgagcagaggagcactgg
tggtccgataaagagaccaccaactgcctcgactgcaagggccaattcacctggtggctg
cgcagacatcactgcaggctttgtggtcggatcttctgctactactgcagcaacaacttt
gtgctgactaagcacagcgggaagaaggagcgctgctgcagggactgctacaaccagcac
agcgcggtggtggagaggttcacagaggcggagctgagtccttcagacactcagcccccc
ccacccggagctggacctcagccccctccagaaccagccccgtataaacccactcccagg
gtcacagtttcagaccccagccccaaatctgacgacggggtttttgacataatcacagaa
gaggaagtgaacggcgtctatgacagtgacaacgtgtcccagaccacagggggctctctg
gagggagatcaggagccacggccccctggagcgctggatataggcaccggagatgtgacc
cctgatgaccctgaagaccatgttcccactgttcaggatacagaaatcaacattctcaaa
tccggagaagtcacgatggctgtccctctcaccattgacgatatttctgggtttggtgaa
ggttcccgggagctcttcatcaaatccagctgttacagtgtaatcactgttgccgtgggt
gaccgtgggccaaccatcagctgggtgttttcctcggagcctaagagcatctccttcagt
gtcgtttacagggaatcagctgatgttcatgtggaacagtcaaaggtcctgattcctctg
actcgctgcaattcccataaagagacaattcagggacagctgaaagtccgaaaccccggc
ctctacacactcatctttgacaactcctactcacggtttatctccaagaaggtcttctac
catctgaccatggagagacccatcatctacgatggaagtgactcccctgaacatggatga
DBGET
integrated database retrieval system
