Trematomus bernacchii (emerald rockcod): 117496674
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Entry
117496674 CDS
T09643
Symbol
mmp2
Name
(RefSeq) 72 kDa type IV collagenase
KO
K01398
matrix metalloproteinase-2 (gelatinase A) [EC:
3.4.24.24
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
117496674 (mmp2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tben01002
]
117496674 (mmp2)
Enzymes [BR:
tben01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.24 gelatinase A
117496674 (mmp2)
Peptidases and inhibitors [BR:
tben01002
]
Metallo peptidases
Family M10
117496674 (mmp2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M10
fn2
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_5
DUF4953
Reprolysin_4
Motif
Other DBs
NCBI-GeneID:
117496674
NCBI-ProteinID:
XP_034004285
LinkDB
All DBs
Position
Unknown
AA seq
657 aa
AA seq
DB search
MGSSMIFSCRRIVLKVFLFQFIAFQSTYAAPSPIIRFPGDDTPRTDKEVALHYLNKFYGC
PQDRCNLMVLKDTLKKMQKFFSLQETGEIDPKTVDIMKKPRCGVPDVANYQFFHRKPMWQ
KKDITYRILGYSPDLDEGVINDAFFRAFKVWSDVTPLTFERLMDGEADIMINFGRNEHGD
GYPFDGKDGLLAHAFAPGPGIGGDSHFDDDEQWSLGDGQVVKVKFGNADGEFCKFPFLFM
GTEYKSCTPQGRDDGFLWCSTTYNFEEDGKYGFCPHELLFTIAGNAEGAACKFPFIFQGE
KYDSCTTEGRDDGYRWCATTDNYDVDTSFGFCPETAMSTVGGNAEGSPCIFPFTFLGDTY
EACTSSGRSDGKMWCASTKSYDDDRKWGFCPDQGYSLFLVAAHEFGHALGLEHSQDPGAL
MAPVYTYTKDFRLSNDDINGIQELYGGSTDKPLSPTQGPVTPMDICKEPVVFDAVAQIRG
ETFFFKDRFLFRSVNFRSKPTGPMLVATYWPDLPIKIDAAYENPVEENTVFFAGNEVWVY
KADALQSGYPKRLSSFGLPTDLAKIDSAFNFRKNRKTYMFAGDQFWRYNEDTKTMDAGFP
KLIADSWNGLPDDIDSSFSLNGIDYSYFFKGNHYFKLEDSSLKIVKLGEITKDWLGC
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgggctcttcgatgatattcagctgtcgtcggattgttctcaaagtgtttttgtttcag
ttcatcgcttttcaatcaacatatgctgccccttcgcctattatcaggtttccaggagac
gatactcccagaacagacaaagaagttgctctgcactatctgaataagttttatggatgc
ccacaagacagatgtaacctcatggtgctcaaggacaccctgaagaaaatgcaaaagttc
ttctctctgcaagaaactggagagattgaccccaaaactgtggatatcatgaaaaagccc
cgctgtggcgtcccagatgtggccaattaccaattcttccacaggaaacccatgtggcag
aaaaaagacattacttacagaatccttggatacagccccgacctggacgagggagtcatt
aatgatgctttcttcagagccttcaaagtgtggagcgacgtcaccccactcacattcgaa
cgcttaatggacggagaggctgacatcatgattaactttggccgcaatgagcatggagat
ggttaccccttcgacggcaaagacggcctcttggctcatgcctttgctccgggaccagga
attggcggagactctcactttgatgatgatgagcagtggtcgctgggagatggccaagtg
gtgaaggtgaagttcggcaatgctgatggggagttctgtaaattccccttcctgttcatg
ggcactgaatataaaagctgcacacctcagggtcgagacgacggcttcctgtggtgctcg
accacttacaactttgaagaagatggcaaatatggcttctgccctcatgaactactgttc
accattgctggaaacgcagagggcgctgcatgtaaattccccttcatctttcagggagaa
aagtatgattcatgcacgactgaaggcagggatgatggttaccgctggtgtgccaccact
gacaactatgatgtggacacgtccttcgggttctgccctgagactgccatgtccactgtt
ggaggaaatgcagagggaagcccctgcatcttccccttcactttcttgggtgacacctat
gaggcctgtacctcatctgggcgcagtgatggcaagatgtggtgcgcctccaccaagagc
tacgatgatgaccgcaaatggggtttctgtcctgaccaaggctacagtttgttcctggtg
gccgctcatgagtttggtcatgcccttggcttggagcactctcaggaccccggagcattg
atggcccccgtctacacttacactaaagacttcagactttctaatgatgacatcaacggc
atccaggagctttacggtgggtcgacagacaagcctttgtctccaacccagggtccagtc
actccaatggacatctgtaaagagccagttgtctttgatgctgtagcacaaatcagagga
gagaccttcttcttcaaggacaggttcctgttcaggtcagtaaacttcagaagcaagccc
accggcccgatgctcgtggccacctactggccggacctgcctatcaagatagacgctgca
tatgaaaacccagtggaggaaaacacagtgttcttcgcaggtaatgaggtgtgggtctac
aaagcagacgcgctgcagtcaggctatcccaagaggctctccagcttcggacttcccact
gacctggcgaaaattgactctgccttcaacttcaggaagaacaggaagacttacatgttt
gctggggaccaattctggagatacaatgaagatacaaagacaatggacgctggcttccca
aaacttattgctgattcttggaatggtctcccagatgacatcgactcttccttcagtctt
aatggcattgattacagctacttcttcaaaggcaaccactatttcaaactggaagacagc
agcttgaagatcgtcaagttgggtgaaatcacaaaggactggctcggctgttga
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