KEGG   Trematomus bernacchii (emerald rockcod): 117499111
Entry
117499111         CDS       T09643                                 
Name
(RefSeq) LOW QUALITY PROTEIN: histone demethylase UTY-like
  KO
K11447  lysine-specific demethylase 6A [EC:1.14.11.68]
Organism
tben  Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:tben00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tben03036]
    117499111
Enzymes [BR:tben01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.68  [histone H3]-trimethyl-L-lysine27 demethylase
     117499111
Chromosome and associated proteins [BR:tben03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    MLL3/MLL4 complex
     117499111
   Histone demethylases
    117499111
SSDB
Motif
Pfam: KDM6_C-hel TPR_1 KDM6_GATAL JmjC TPR_2 TPR_8 TPR_17 TPR_16 TPR_12 TPR_19 TPR_CcmH_CycH TPR_9 TPR_11 TPR_7 ANAPC3
Other DBs
NCBI-GeneID: 117499111
NCBI-ProteinID: XP_034007302
LinkDB
Position
Unknown
AA seq 1455 aa
MQSCGVSVAVAACAAARSLGSASSSSGDEGKKMAAGKASETEEDFPTLTAQERDSLAGID
SSLFGFQKLHEDGARTKALLMKAVRCYDSLILKAEGKVEPELFCQLGHFNLLLEDYPKAL
SAYQRYYSLQSDYWKNAAFLYGLGMVYFHYNAFQWAIKAFQEVLYIDPGFSRAKEIHLRL
GLMFKVNTDYESSLKHFQLALIDSNPCTLSKAEIQFHIAHLYEIQKRYRAAKEAYESLLQ
AEDLPAQVKATTLQQLGWMHHTVEQLGDRASRDSYAIQCLQKSLEADPNSGQSWYFLGRC
YSSIGKVQDAFISYRQSIDKSEASADTWCSIGVLYQQQNQPMDALQAYICAVQLDHSHSA
AWMDLGTLYESCNQPHDAIKCYINATRSKGCTNTTALTHRIKCLQAQLSNPQLSSLQGKS
KMLPLIEEAWSLPIPAELTSRQGGLSSAPQQACKPNHSAEGGGPSLPPHVGPLGQAEDPS
CPAKRRRASSPGKGDSWVSNPPQQPVPNWYLSPQKLQVLEQLRSNRVSLKPPQLQMLGQL
EAQLAMMQQHQHQMRQNASGSQVRPSLPNGPTTNSLPSPNPSLRPHLGPQRPLCPPLANG
PVGLGPHGHSDPLPAVDSSNRSNNQSGPAATGPNGDVPYLQPAGSGDAALLPHTCTSAQT
QDATLRPALHLNSSQGLQKGCVPHASGSSSEGLPSHSQTPNNQVGHSTNAPSPRPQPHNH
LPSPPSLPLSSTSGGAAPGATKDSNTAAAIATAAASLGNGGPEGKTPPSADGKTTAEDGL
TNHVHSEDGKGAEGGEKPSLSADNPRLSALLAGGKGPEGGEGPSQGTSSTTSDKKVNNIH
PAALPSTPHAQGSSAASSPISAISTATPSPKSSEHTQTGAHSPANAAPPHTSTAPAVNGN
GKGGISEDSQSPLKAEPPAVTSLKATPPHAHSSSSSSSSSSISIYPSSTDVLKACRNLGR
NGLSNSSILLDKCPPPRLPPPPSPALPKDKLNPPTPSIYLENKRDAFFPPLHQFCTNPSN
PVTVIRGLAGALKLDLGLFSTKTLVEANPEHLVEVWTQLSQPADENWDPAGTKKMWRCES
ARAHTTIAKYAQYQAASFQESLREENEKKALKEPSDTEPASAESVARKRRGPLKHIKFGT
NIDVSDERKWKQQLQELSKLPAFARVVSAGNLLSHVGHTILGMNTVQLYMKVPGSRIAGH
QEHNNFCAVNINIGPGDCEWFAVPEPYWGVMSNFCEKNNINFLMGSWWPNLEDLYEADVP
VYRFIQRPGDLVWLNTGTVHWVQAIGWCNNIAWNVGPLTAHQYKLAVERYEWNKLQSVKS
MVPMVHLSWNMARNIKVSDHKLFEMIKYCLLRTLKQCQWVKEALATAGKETVLRPRTRDE
PAHYCTICEVEVFNLLFVRRELLSKKQYVVHCQDCARKGSATLDNFVVLEQHRMDDMMQV
YDQFTLAPPLHSSSS
NT seq 4368 nt   +upstreamnt  +downstreamnt
atgcaatcgtgcggtgtgtctgtcgccgtcgctgcctgcgctgctgctcggagtctcggc
tcggcttcttcttctagtggtgatgagggaaagaaaatggcggcgggaaaagcgagtgaa
acagaggaggactttccgacactgacagcccaggagagggacagtttggccgggatcgac
agctcactgtttggatttcagaagcttcatgaagatggcgccagaacgaaggccctgttg
atgaaggctgttcgctgctacgactcgctcatccttaaggccgagggcaaagtggagccg
gagttattctgccagctcggccacttcaacctcctcctggaggattacccaaaagcatta
tcggcataccagaggtactacagtttacagtcagactactggaagaatgctgcctttctg
tacggcctgggaatggtctacttccactataatgcctttcagtgggcgatcaaagcattc
caggaggtgctgtacatcgacccgggcttctcccgggccaaagagatccacctgcgcctg
ggtctcatgttcaaggtcaacacagactacgagtcaagcctaaagcattttcagctggct
ttgattgactccaacccctgcactttgtccaaagctgaaattcagttccacatcgctcat
ttgtatgagattcagaagagataccgggctgccaaggaggcctacgagagcctcctgcag
gcggaggatcttcctgcacaggtgaaggccactaccctgcagcagctaggctggatgcat
cacacagtggagcagctcggggacagagccagcagggacagctatgccatccagtgtctg
cagaaatctctagaggccgaccccaactccggacagtcctggtacttcctgggcaggtgc
tactccagtatcgggaaagtccaggacgccttcatctcctatcggcaatccattgacaaa
tcagaggccagcgcagatacctggtgctctataggggtgttgtaccagcagcagaaccag
cccatggacgccctgcaggcttacatctgcgccgtgcagctggaccacagccactcggcc
gcctggatggacctgggcacgctgtacgagtcctgcaaccagccgcacgacgccatcaag
tgctacatcaacgccacgcgcagcaagggctgcaccaacaccacggcgctgacacaccgc
atcaaatgcctgcaggctcagttgagtaacccccagctcagtagcctacagggtaaaagt
aaaatgctccctcttattgaggaggcatggagtctaccaatccccgctgagctaacctcc
aggcagggaggcctgagcagtgcaccacagcaggcttgtaagcccaatcacagtgcagag
ggcgggggcccctctctgcccccccacgtgggtccgctgggccaagcagaggacccgtcc
tgccccgccaagaggaggagggcctccagcccgggcaagggggattcatgggtcagtaac
cccccacagcagccagtccccaactggtacctctccccgcagaaattacaggtgctggaa
cagttgcggagtaaccgagtgagcctgaagcccccccagctgcagatgttgggacagctg
gaggctcagctcgccatgatgcagcagcaccagcaccagatgagacagaatgcctcagga
agtcaggtgcgcccctctctccccaacggccccaccaccaactccctcccctcccccaac
cccagcctccggccccacctgggcccccaacggcccctgtgcccgcctctggccaacggg
cccgtgggccttgggccacacggacactcagaccccctccccgcggtcgacagtagtaac
agaagtaataatcagtcggggcccgcggccacaggacccaacggagacgtgccttacctg
cagcctgccggcagcggcgacgcagcactgctacctcacacctgcacaagcgcgcaaaca
caggacgccacgctgcgcccggccctgcacctaaactcctctcaggggcttcagaagggg
tgtgttccccatgcatcgggctccagtagtgaggggctcccgtctcactcccagaccccc
aacaatcaggttggacattccactaacgccccatcgccacgaccgcagcctcacaaccac
ctcccgtcccccccctccctccccctctcctctacctcaggtggagcagcacctggtgct
accaaagatagcaacaccgcagccgccatcgccacggcagcagcttccctcggcaacggg
ggccccgagggcaaaacgcctccgtcagctgatggcaaaacgacggcggaggacggacta
accaatcacgttcactcggaggacggcaagggggcggaaggcggcgagaagccgagcctt
agcgcagacaatcctagactatctgccctgctggcgggggggaagggccctgaggggggg
gaggggccgtcgcaagggacttcatccaccacgtcagacaagaaagtcaacaacatccac
ccggccgccctgccctccaccccccacgcgcagggcagctcggccgcctcctcgcccatc
tctgccatatccaccgccacgccctcccccaaatcttcagaacacacacagacgggcgca
cacagccccgccaacgccgcccccccccacacgtccaccgcgcccgccgtgaacggtaac
ggtaaaggaggtatctccgaggactctcagagcccgctgaaggccgagccccccgccgtc
accagtctcaaagctacgcctcctcacgcacacagctcctcctcgtcctcttcctcatct
tcgatatccatctaccccagctccacagacgtgctgaaggcctgcaggaacctggggagg
aatggtctctccaacagcagtatcctcctcgataagtgccccccgccccggctgccccct
ccaccctcaccagccctgcccaaagacaagctcaacccccccacaccgagcatctatctg
gagaacaagagggacgctttcttcccccccctgcaccagttctgcacaaacccctccaac
cccgtcaccgtcatcagaggactggctggagcactcaaactggacttgggtcttttctcc
acgaagacgttggtggaggccaacccggagcacctggtggaggtctggacgcagctctcg
cagcccgccgatgagaactgggacccagccggcaccaagaaaatgtggcgctgcgagagc
gcccgagcccacaccaccatcgccaaatacgcccagtaccaggcggcgtccttccaggag
tccctgcgggaggagaatgagaagaaggcactaaaggagccctcggacacagagccagcg
tcagcagagagtgttgcacgcaaaagaaggggacccttaaagcacatcaagttcggaacc
aacatcgacgtgtcggacgagaggaagtggaaacagcagctccaggagctcagtaagctc
ccggccttcgctcgagtcgtctccgccggcaacctgctgagccacgtgggccacaccata
ctgggcatgaacacagtgcagctctacatgaaggtccccgggagcaggatagcaggtcac
caggaacacaacaacttctgtgcggtcaacatcaacatcggcccaggagactgcgaatgg
tttgccgtaccggagccctactggggagtgatgagcaacttctgtgaaaagaacaacatc
aacttcctgatgggctcgtggtggcccaacctggaggacctgtacgaggcggacgtgccc
gtgtaccgcttcatccagaggcccggggacctggtgtggctgaacaccggcaccgtgcac
tgggttcaggccatcgggtggtgcaacaacatcgcctggaacgttggacctctcaccgcc
caccagtacaagcttgccgtggagcgctacgagtggaacaagctccagagtgtcaagtca
atggttcccatggtgcacctctcctggaacatggcgcgcaacatcaaagtgtccgaccac
aagctgttcgagatgatcaagtactgcttgttgcggacgttgaagcagtgccagtgggtg
aaggaagctctggcgacagcaggcaaggagacggtgctgaggccgaggacccgggacgag
ccggcccactactgcaccatctgtgaggtggaggtgttcaacctgctgtttgtgcgccgc
gagctcctgtccaagaagcagtacgtggtgcactgccaggactgcgcccggaaaggcagt
gccacgctggataactttgtggtgctggagcagcaccgcatggacgacatgatgcaggtc
tacgaccagttcacattagcccctcctcttcactcatcttcatcttga

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