Trematomus bernacchii (emerald rockcod): 117499504
Help
Entry
117499504 CDS
T09643
Symbol
cxcl12a
Name
(RefSeq) chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1)
KO
K10031
C-X-C motif chemokine 12
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04060
Cytokine-cytokine receptor interaction
tben04672
Intestinal immune network for IgA production
tben04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
117499504 (cxcl12a)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
117499504 (cxcl12a)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
117499504 (cxcl12a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
tben04052
]
117499504 (cxcl12a)
00536 Glycosaminoglycan binding proteins [BR:
tben00536
]
117499504 (cxcl12a)
Cytokines and neuropeptides [BR:
tben04052
]
Cytokines
Chemokines
117499504 (cxcl12a)
Glycosaminoglycan binding proteins [BR:
tben00536
]
Heparan sulfate / Heparin
Chemokines
117499504 (cxcl12a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IL8
RPA_interact_N
Motif
Other DBs
NCBI-GeneID:
117499504
NCBI-ProteinID:
XP_034007808
LinkDB
All DBs
Position
Unknown
AA seq
98 aa
AA seq
DB search
MDIKLLALLAALMVVIYAPPSQAKPISLVERCYCRSTVNSLPRGYIRELRFIHSPNCPFQ
VIAKLKSNKEVCVNPDIPWLQQYLKNAIKRMKKSRKGH
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atggatatcaagctgttggcactcctggctgcgctcatggtggtgatatatgcgcctcca
tcacaagcaaagcctatcagcctggtggagagatgctactgtcgttccacggtcaacagc
ctcccacgaggctacatccgagagctcaggttcatccactcgcccaactgccccttccaa
gtgattgctaagctgaagtcaaacaaagaagtgtgtgtgaacccagatatcccgtggctg
cagcagtacctgaagaacgccatcaaaagaatgaagaaatccagaaagggccactaa
DBGET
integrated database retrieval system
