Trypanosoma brucei gambiense: TbgDal_II2590
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Entry
TbgDal_II2590 CDS
T06526
Name
(RefSeq) small nuclear ribonucleoprotein SmD1, putative
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
tbg
Trypanosoma brucei gambiense
Pathway
tbg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tbg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TbgDal_II2590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tbg03019
]
TbgDal_II2590
03041 Spliceosome [BR:
tbg03041
]
TbgDal_II2590
03032 DNA replication proteins [BR:
tbg03032
]
TbgDal_II2590
Messenger RNA biogenesis [BR:
tbg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
TbgDal_II2590
Spliceosome [BR:
tbg03041
]
Complex A
U1 snRNP components
Sm proteins
TbgDal_II2590
U2 snRNP components
TbgDal_II2590
Complex B
U1 snRNP components
TbgDal_II2590
U4/U6.U5 tri-snRNP components
TbgDal_II2590
Complex C
U2 snRNP components
TbgDal_II2590
DNA replication proteins [BR:
tbg03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
TbgDal_II2590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
23858656
NCBI-ProteinID:
XP_011771820
UniProt:
C9ZJF6
LinkDB
All DBs
Position
2:complement(536725..537054)
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AA seq
109 aa
AA seq
DB search
MGHQNMLHNINRTLRVTLVDGREMTGKMLLFDKFMNVVLADTVETRKETKKMKDAGISPQ
RKLGMILLRGEYVVAVSVLKDNVSEDKAQPANFESATREKLAGAKRKRD
NT seq
330 nt
NT seq
+upstream
nt +downstream
nt
atgggccaccaaaatatgcttcacaacatcaaccgcacgctgcgggtaacacttgtggac
ggcagagagatgacggggaagatgctcctctttgataagttcatgaatgttgtgttggct
gacacggtggagactcgtaaagagacaaaaaagatgaaagatgcaggtatcagcccacaa
cgtaaattaggcatgattttactacgtggtgaatatgttgtggctgtctccgttctgaag
gataacgtcagcgaagataaggcacaaccagcaaactttgagagcgcaactcgggagaag
ttagctggagccaagcggaaacgcgattga
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