Trypanosoma brucei gambiense: TbgDal_V5200
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Entry
TbgDal_V5200 CDS
T06526
Name
(RefSeq) hypothetical protein, conserved
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
tbg
Trypanosoma brucei gambiense
Pathway
tbg03420
Nucleotide excision repair
tbg04120
Ubiquitin mediated proteolysis
tbg04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tbg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
TbgDal_V5200
04120 Ubiquitin mediated proteolysis
TbgDal_V5200
09124 Replication and repair
03420 Nucleotide excision repair
TbgDal_V5200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tbg04121
]
TbgDal_V5200
03400 DNA repair and recombination proteins [BR:
tbg03400
]
TbgDal_V5200
Enzymes [BR:
tbg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
TbgDal_V5200
Ubiquitin system [BR:
tbg04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
TbgDal_V5200
Multi subunit type E3
SCF complex
Ring finger protein
TbgDal_V5200
Cul2 complex
TbgDal_V5200
Cul3 complex
TbgDal_V5200
Cul4 complex
TbgDal_V5200
Cul7 complex
TbgDal_V5200
Cul8 complex
TbgDal_V5200
Cul9 complex
TbgDal_V5200
DNA repair and recombination proteins [BR:
tbg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
TbgDal_V5200
TCR (transcription coupled repair) factors
Cul4-CSA complex
TbgDal_V5200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-RING_16
zf-RING_11
zf-C3HC4_3
Cmr2_Zn-bd
Motif
Other DBs
NCBI-GeneID:
23861536
NCBI-ProteinID:
XP_011773667
UniProt:
C9ZPQ2
LinkDB
All DBs
Position
5:1112400..1112879
Genome browser
AA seq
159 aa
AA seq
DB search
MEDSSVSSSLGLGSVDGGCVGAPLECRITAKQWNAVAVWSWNAQMDTCPICKGPVADMCI
ECRGNAGSARRQNAVSQNYNNDEDENRSNKRSEFGTSKVQQPLSSSSCSDNAADECLVVW
GACGHVFHHHCISRWAQQRPLCPICGCKWAVSKTAKNDY
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atggaggactcctcagtgagttcttcactgggtttaggttctgtagatggtggatgcgtg
ggggcacctctggaatgccgtataaccgcaaagcagtggaatgcggtggcggtgtggtcc
tggaatgctcaaatggatacatgtcccatttgtaagggtcctgttgcagatatgtgtatt
gaatgccgaggcaacgcaggcagtgcaaggcgtcaaaatgcggttagccagaactacaac
aacgatgaggatgaaaaccgtagtaacaaacgaagtgaatttggtaccagtaaagttcag
caaccgctgtcgtcgtcttcatgcagtgataacgcagcggatgagtgccttgtcgtgtgg
ggcgcatgcgggcacgtgtttcatcatcactgcatttcaaggtgggcgcagcaacggccg
ctgtgtcccatttgtggttgtaagtgggcggtgtccaaaaccgcaaagaatgattactaa
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