Thiocapsa bogorovii: LT988_00595
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Entry
LT988_00595 CDS
T07840
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
tbog
Thiocapsa bogorovii
Pathway
tbog01501
beta-Lactam resistance
tbog01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
tbog00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LT988_00595
01503 Cationic antimicrobial peptide (CAMP) resistance
LT988_00595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tbog03036
]
LT988_00595
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tbog02000
]
LT988_00595
01504 Antimicrobial resistance genes [BR:
tbog01504
]
LT988_00595
Chromosome and associated proteins [BR:
tbog03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
LT988_00595
Transporters [BR:
tbog02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LT988_00595
Antimicrobial resistance genes [BR:
tbog01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LT988_00595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
BSH_RND
YknX_C
BSH_CzcB
RND-MFP_C
Biotin_lipoyl
Transketolase_C
BSH_YhbJ
CzcB_C
Motif
Other DBs
NCBI-ProteinID:
UHD16600
LinkDB
All DBs
Position
complement(124436..125518)
Genome browser
AA seq
360 aa
AA seq
DB search
MQTTSGDTFVVQQAQGAPTVSLGGSVVPYKEVTLAAQLPGRVTFIAGREGDTFKEKDLLV
AIGDEELLANRRALLAQMASADAQLRNAGVQYSREIYSPQSRSAMGGMGLPNLFDQMFTQ
PVESFVGERDRTAERSADLFASGIQIQEAQNALLRLQAELQALDSKIRDARSIAPFDGVI
VRKLIEVGDTVQPGQPMLNYADVEYLQVEVDVPARLRPGLREGMMVQAELDPDNRRVPVR
VAQIFPMADPQRHTVKIKFDLPQGVSEPGMYAKVLVPDLSAPARANPVIPSSAVRYNGSL
PGVYVVNERGEPQLRLIRVGEELSGGMVTVLSGLRAGESVLTNPGPRVTAGWASGAPADR
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgcagaccacttcgggcgataccttcgtcgttcaacaggcgcaaggcgccccgacggtg
tcgctgggagggagcgtcgtcccctataaagaggtgacgcttgcagcccagcttccgggg
cgcgtcaccttcatcgccgggcgcgaaggcgataccttcaaggaaaaggatctccttgtg
gcaatcggcgacgaggagcttctcgcgaaccggcgcgcactgctcgcacagatggcgagc
gccgacgctcaactgcgcaatgccggcgttcaatactccagagaaatctactctccgcag
tcgcgctccgcgatgggcgggatgggactgccgaacctgttcgaccagatgtttacgcaa
ccggtcgaaagcttcgtcggggagcgcgaccgcaccgcggagcgctcggccgatctcttc
gcatccgggattcagatccaagaagcgcaaaacgcgctgctccgactccaagcggagctg
caagcactcgattccaagatccgcgatgcccgcagcatcgcgcccttcgacggtgtgatc
gtgcgcaagctcatcgaggttggggacacggtccaaccggggcagcccatgctcaactat
gcggatgtggaataccttcaagtcgaggtcgatgtgccggcccggctgcgtcccggcttg
cgtgaagggatgatggtgcaggccgagctggatccggacaatcgacgtgtcccggtccgc
gtggcgcagatcttcccgatggcggatccacagcgccacaccgtcaagatcaagttcgat
ctcccgcaaggcgtgtccgagccagggatgtacgccaaggtcttggtccccgacctcagt
gcacctgcgcgggccaacccggtgatcccgagcagcgcggtgcgctataacggcagtctg
ccgggcgtctatgtcgtgaacgagcgaggcgagcctcagttgcgactgatccgcgtcggc
gaggagctctccggcgggatggtgaccgtgctcagcgggctgcgtgccggcgagagtgtg
ctgacgaatcccggccctcgggtcacggccggttgggcgagcggggcacccgccgatcgc
tga
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