Thiocapsa bogorovii: LT988_03215
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Entry
LT988_03215 CDS
T07840
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
tbog
Thiocapsa bogorovii
Pathway
tbog00300
Lysine biosynthesis
tbog00550
Peptidoglycan biosynthesis
tbog01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tbog00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LT988_03215
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LT988_03215
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tbog01011
]
LT988_03215
Enzymes [BR:
tbog01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
LT988_03215
Peptidoglycan biosynthesis and degradation proteins [BR:
tbog01011
]
Precursor biosynthesis
Amino acid ligase
LT988_03215
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Glyco_trans_4_4
Motif
Other DBs
NCBI-ProteinID:
UHD17081
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All DBs
Position
671891..673330
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AA seq
479 aa
AA seq
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MPKHALSDLLTTLDFAWRREPATPGPLNNIQWRANACDAGSILFFQRFDDGRTDAEIIER
YLVDSACSVLVTNRMIEGIERLPGKGIYVTHPGDWAEVVARFCDRVYPLDTDGTVFLGVT
GTNGKTTTVKYLEAILSAHGRPVLSVGTLGLSLAGEPLANTGFTSPPLIELRRLLHAHRD
RYAVVAMEVSSHALDQGRAHGIPLQNAAWTNFTQDHLDYHGGEAAYFAAKARILDMIAGG
GRLYTTSPDVAERLSENGRPRVPVQVLPEATLAPEALAAKPFLALAHNRRNYALAVALAD
GVLGPEAREDWRHLSAVDGRFECRVVGNRTLVVDFAHTPDALETILTAIRDAFPQARVAT
LFGCGGDRDRFKRPLMGAAVARHSDYSIVTSDNPRFEDPERIIADILTGMPDAGREVVIE
RPRAIARLLDFLAERPEDEPWVALVAGKGHERYLDAKGHKTPYSDQDEVERNLIRLGWV
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaacacgccctttccgatctgttgaccacgctcgatttcgcttggcggcgcgaa
ccggccacgcccggccccttgaataacatccaatggcgcgcgaacgcctgcgatgccggc
tcgatcctcttcttccaacggttcgacgacgggcgcaccgacgccgagatcatcgagcgc
tatctcgtcgatagcgcctgttccgtgctggtcaccaaccgcatgatcgagggcatcgag
cgactgcccggcaagggcatctatgttacgcacccaggcgactgggccgaggtcgtcgcg
cgcttctgcgatcgcgtctatccgctggacaccgatggcacggtctttctgggcgtcacc
ggcacgaacggcaagaccacgacggtcaaatatctggaggcgatcctctcggcacatggg
cggcctgtcctctcggtcgggacgctcggcctctccttggcgggcgagccgctggccaac
accggattcacctcgccgcccctgatcgagctccgccgtctgctgcacgcccatcgagac
cgatacgcggtggtcgcgatggaggtcagcagccatgccctggatcaagggcgtgcgcac
ggcatcccgctgcagaacgccgcctggaccaacttcacacaggaccatctggactatcac
ggcggcgaggcggcctatttcgcggccaaggcacgcatcctggacatgatcgcgggcggt
ggccgtctctacacgaccagtccggatgtcgccgagcggttgtcggagaatggccgaccg
cgggttcccgtccaggtcctgccagaggcgacgctcgcccccgaggcgctcgccgccaag
cccttcctcgcgctggctcacaatcgccgaaactatgcccttgccgtcgccttggccgac
ggggtcttggggccggaggcacgcgaggactggcgccacctcagcgcggtggacggacgc
ttcgagtgccgcgtcgtcggcaaccgcaccctggtggtcgactttgcccacacaccggat
gcactcgagaccatcctgaccgcgatccgcgacgccttccctcaagcgcgggtcgccacc
ctcttcggctgcggaggagaccgcgaccgctttaagcgcccgctcatgggtgcggcggtg
gcgcgtcattccgactacagcatcgtgacctcggataatccgcgtttcgaagatcccgaa
cgcatcatcgcggatatcctcacgggcatgcccgacgcgggtcgtgaggtggtgatcgag
cgaccgcgcgcgatcgcgcgtctgctcgacttcctggccgagcggcccgaggatgagccc
tgggtcgccctcgtcgccgggaagggtcacgagcgctatctcgatgccaagggccacaag
accccctacagcgatcaggacgaggtcgagcgcaacctcatccgtctcggctgggtctaa
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