KEGG   Thiocapsa bogorovii: LT988_04275
Entry
LT988_04275       CDS       T07840                                 
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
  KO
K03585  membrane fusion protein, multidrug efflux system
Organism
tbog  Thiocapsa bogorovii
Pathway
tbog01501  beta-Lactam resistance
tbog01503  Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:tbog00001]
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    LT988_04275
   01503 Cationic antimicrobial peptide (CAMP) resistance
    LT988_04275
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tbog03036]
    LT988_04275
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:tbog02000]
    LT988_04275
   01504 Antimicrobial resistance genes [BR:tbog01504]
    LT988_04275
Chromosome and associated proteins [BR:tbog03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Divisome proteins
    LT988_04275
Transporters [BR:tbog02000]
 Other transporters
  Accessory factors involved in transport [TC:8]
   LT988_04275
Antimicrobial resistance genes [BR:tbog01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump MexAB-OprM [MD:M00718]
    LT988_04275
SSDB
Motif
Pfam: HlyD_D23 HlyD_3 Biotin_lipoyl_2 Biotin_lipoyl CusB_dom_1
Other DBs
NCBI-ProteinID: UHD17279
LinkDB
Position
930643..931728
AA seq 361 aa
MPSLRPVTRLLTRCLPCVFVTATLTAPSPASAVAVLVAEARSMPLAERVEALGTLKANES
VNITANVTETISAIHFDDGQRVSEGDILVELTSVEQHAQLDEAQVRAVEAERQYQRVKAL
VAQGAASESLLDERKRDLDAARAVLVAIESRLSDRLIKAPFDGVLGLRNVSRGTLVEPAD
TITTLDDDSFMKLDFTVPSVFMSALVPGLRIEARAPAYGDRTFEGVVRGVDSRVDPVTRS
IQVRAVIPNPERTLKPGLLMRVELLVDPRDALVVPEAAILHQGQDHFVQVIVEDGDGLTS
ERRQIQIGARKPGLVEVREGLAKGDRVIEHGHLKARPGQPVEIARRDDAQADTKGVADPA
R
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgccatccctacgaccggtcacccgtctcctcacgcgttgcctaccctgcgtcttcgtc
accgcaaccctgacggcaccgagccccgcatcagccgtcgccgtcttggttgcggaagcc
cgatcgatgcctttggccgagcgggtcgaagcactcgggactctgaaggccaacgaatcg
gtcaacatcaccgcgaatgtcaccgagacgatctcggcaattcacttcgacgacggccaa
cgcgtcagtgaaggcgacatcctggtcgagctgaccagcgtcgaacagcatgcccaactc
gacgaggcgcaggtgcgggcggttgaggccgagcgtcagtaccagcgggtcaaggcattg
gtggcgcagggcgccgcatccgagtcgctgctcgacgagcgtaaacgtgacctcgacgcg
gcccgcgccgtcttggtggccatcgaatcacgcctgtcagaccgcctcatcaaggcaccc
ttcgacggcgtgctggggcttcgcaacgtcagtcgcggcacgctggtcgagccggccgat
acgattacgacgctcgatgacgacagctttatgaagcttgatttcacggtcccgagcgtc
ttcatgagcgcgcttgtgccggggctgagaatcgaggcgcgcgccccggcctacggagat
cggaccttcgagggtgtggtgcggggtgtcgacagtcgcgtcgacccggtcactcgctcc
attcaggtgcgcgccgtgatccccaatccggagcgcacgctcaagcccggactgctgatg
cgggtcgagctcctggtggatccgcgcgacgcgctggtcgtgccggaagccgcgattctg
caccaaggccaggatcacttcgtgcaggtcatcgtggaggacggggatggtttgacctcg
gagcgccgtcagatccagatcggcgcgcgcaagcccggcctggtggaggtgcgcgaggga
cttgcgaaaggcgatcgcgtcatcgagcacggccacctcaaagcgcgtccgggacaacct
gtcgagatcgcacgcagggatgacgctcaagccgacacgaagggcgtggcggaccccgca
cgatga

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