KEGG   Thiocapsa bogorovii: LT988_05105
Entry
LT988_05105       CDS       T07840                                 
Symbol
casB
Name
(GenBank) type I-E CRISPR-associated protein Cse2/CasB
  KO
K19046  CRISPR system Cascade subunit CasB
Organism
tbog  Thiocapsa bogorovii
Brite
KEGG Orthology (KO) [BR:tbog00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:tbog02048]
    LT988_05105 (casB)
Prokaryotic defense system [BR:tbog02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-E factors
    LT988_05105 (casB)
SSDB
Motif
Pfam: CRISPR_Cse2
Other DBs
NCBI-ProteinID: UHD17429
LinkDB
Position
1124366..1124929
AA seq 187 aa
MSEHAQSFIAHLTGLADHDRGALAHLRRSLGFDPGAFPRAYPYVERFVGPERHAEDPWRK
ALYLGAGLFALHPEHRQGETLASALGHLAHVRESTSIERRFIALLSAEPEGLPDLLRQVV
SLLAADDCAVDYVRLLDDLGIWLRPFGGDGRDRIRQRWARDFYCAYDAATARTESTPSTP
DPLQRSA
NT seq 564 nt   +upstreamnt  +downstreamnt
atgagcgagcatgctcaatccttcatcgcccacctgacgggtctcgccgatcatgatcgc
ggcgccttggcacacttgcggcgcagcctgggattcgatcccggagccttcccccgcgcc
tatccctatgtcgaacgcttcgtcggacccgagcgacatgcggaggatccttggcgcaag
gcgctctatctcggcgccgggctgtttgccctccatccggagcaccggcaaggcgagacc
ctcgcatcagcgttggggcatctcgcccatgtccgtgaaagcacgagcatcgagcggcgt
ttcatcgcgctccttagcgccgaaccggagggcttgcccgacctgttgcgccaagtcgtt
tcactcttggccgccgacgattgcgccgtcgactatgttcgcctactcgatgacctcggc
atctggctgcgtcctttcgggggggatggacgggatcgcatacgtcagcgttgggcgcgc
gatttttactgtgcctacgacgcagcaacggctcggaccgaatctaccccatcaaccccc
gaccctctgcaacgatctgcctga

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