Thiocapsa bogorovii: LT988_07305
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Entry
LT988_07305 CDS
T07840
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
tbog
Thiocapsa bogorovii
Pathway
tbog01501
beta-Lactam resistance
tbog01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
tbog00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LT988_07305
01503 Cationic antimicrobial peptide (CAMP) resistance
LT988_07305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tbog03036
]
LT988_07305
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tbog02000
]
LT988_07305
01504 Antimicrobial resistance genes [BR:
tbog01504
]
LT988_07305
Chromosome and associated proteins [BR:
tbog03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
LT988_07305
Transporters [BR:
tbog02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LT988_07305
Antimicrobial resistance genes [BR:
tbog01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LT988_07305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
Gp77
MscS_porin
Motif
Other DBs
NCBI-ProteinID:
UHD17847
LinkDB
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Position
complement(1614020..1615099)
Genome browser
AA seq
359 aa
AA seq
DB search
MRQHRWRHRLQLCLFCALTTPAWGQDPPGVQLAAVETSEIVEEVRLTGTVNALRSSRLST
AVAGLVNKVAVETGGKVTQGDLLIGLDDEQATFELAGARAETEEARARLEEARRRLDEAR
SLGRGNIAATEVSTRETDVAAAQAALARLQAAEAHREVVLRRHRVEAPFDGVVSERSSEL
GEWVTPGDALLMLVDTDHLRLDFQVPQEAYRRIGEDSELLIGGAGPEGDSMAAEIDALVP
VGESQSRTFLLRAIAPEGFAALPGMAVEAVLRISTGKQGLTVSRDAINRYPDGRVTVWIA
EPTDGGLYAVREKRVATGTGFRDRVVVVEGLEGHEQVVVRGNESLEHGMTVRIAERTAR
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcagcaccgatggcgccatcgtctgcagctctgcttgttctgcgcgctgacaacc
ccggcctggggtcaggacccgcccggtgtccaactggcggccgtggaaaccagcgagatc
gtcgaggaggtccggctcaccggaaccgtgaacgcgttgcgaagctcgcgcttgtccacg
gcggttgccggtctcgtgaacaaggtcgcggtcgagacgggcgggaaggtcacgcaaggc
gacctgctgatcgggctggacgatgagcaggcgacgttcgagctcgccggtgcccgcgcc
gaaacggaggaggcgagggcgcggctcgaggaggcccgccgtcgactggacgaggcccgg
tcgctggggcgcgggaacattgccgcgaccgaggtcagcactcgggagaccgatgttgcc
gccgcgcaggccgcgcttgcccggctgcaggccgccgaggcacaccgagaggtggtgttg
cgccggcatcgcgtggaggcgccgttcgacggtgtcgtcagcgagcggtccagcgaactg
ggcgagtgggtcacgccgggggatgccttgctgatgctcgtggacaccgaccatctgagg
ctggattttcaggtgcctcaggaggcctatcggcggatcggcgaagactcagaattgctg
atcggcggcgccggtcccgaaggtgactcgatggcggccgagatcgatgccctggtcccg
gtcggtgaatcgcaatccagaaccttcctgctgcgtgcgatcgcccccgagggctttgcc
gcgttgcccggcatggccgtcgaggcggtgctgcggatctcgacggggaagcagggattg
accgtgtcccgcgatgcgatcaatcgctatccggacggtcgtgtcaccgtctggatcgcc
gagccgacggacggggggctttacgcggtccgggagaaacgcgtcgccaccggcaccggc
ttccgcgaccgcgtcgtcgttgtcgaaggactggaaggccatgagcaggtcgtcgtgcga
ggcaatgaatccctggaacacggcatgacggtgcggatcgcggagcggacggcgcgctga
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