Thiocapsa bogorovii: LT988_11545
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Entry
LT988_11545 CDS
T07840
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
tbog
Thiocapsa bogorovii
Pathway
tbog01501
beta-Lactam resistance
tbog01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
tbog00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LT988_11545
01503 Cationic antimicrobial peptide (CAMP) resistance
LT988_11545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tbog03036
]
LT988_11545
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tbog02000
]
LT988_11545
01504 Antimicrobial resistance genes [BR:
tbog01504
]
LT988_11545
Chromosome and associated proteins [BR:
tbog03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
LT988_11545
Transporters [BR:
tbog02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LT988_11545
Antimicrobial resistance genes [BR:
tbog01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LT988_11545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
Lebercilin
She9_MDM33
HMMR_N
OEP
Motif
Other DBs
NCBI-ProteinID:
UHD18618
LinkDB
All DBs
Position
complement(2546923..2548188)
Genome browser
AA seq
421 aa
AA seq
DB search
MQTADARRAGTLPFVAHHRRSLFRSVFVGLIGAAIGLTGCSSGEQQQQASEPPAVGVIEV
AEQQVNPFFEFVGKIRAAETVALRARVTGFLEERSFQEGGVVEQGQVLFKIEPKQYQATL
AQAEAELAAANASLNRAQVDLARYKELVKDKNVSQQKVDEAEAEVLVQEATVQTAQANIE
KAQLNVDYTQVVAPIGGRIDLAALDVGNLIGPESGVLATINRMDPVKVAFAIAETWYLEL
VQEDVEAKRQGESVDEFTHVPLVRLPDGSLYEHAGRFDFIDNKVDEKTGTVLIRAEFENP
DRLLLPGQFVTVVIERKEAIDAVMIPQAAVLTDQGGAYVLLVNDEDKVEARRIETGQRFG
PNLVVSEGLKPGERVILYGVQKVRPGLTVKPELSAAPSDPMDSATAEDESGGEQKTPDET
Q
NT seq
1266 nt
NT seq
+upstream
nt +downstream
nt
atgcagaccgctgacgcacgccgggccggcacgttgccctttgtcgcccatcaccgccgc
tcgctgtttcgcagcgtttttgttggcctgatcggtgccgcgatcggattaaccggttgt
tcgtccggtgagcagcagcaacaagcgtcggagccacccgcggtgggggtcatcgaggtc
gccgagcagcaggtcaatccattcttcgagttcgtcggcaagatccgcgccgccgagacc
gtggcgctgcgggccagggtgaccggctttttggaggagcgcagtttccaggagggcggc
gttgtcgagcaggggcaggtgctgttcaagatcgagcccaagcaatatcaagcgaccctg
gcccaggccgaggcggaactggccgcggccaatgcctcgctgaaccgcgcccaggtcgac
ctggctcgctacaaggaattggtcaaggacaagaacgtcagccagcaaaaggtcgacgag
gccgaggccgaggtgctggtgcaggaggccacggtacagaccgcccaggcgaatatcgaa
aaggcccagctcaatgtcgactacacgcaggtcgtcgctccaatcggaggtcgcatcgac
ctcgccgccctcgacgtcggcaatctgatcggtccggagtccggcgtgttggcgaccatc
aaccggatggacccggtcaaggtcgccttcgccatcgccgagacctggtacctggagctc
gtgcaagaggacgtcgaggccaagcgccagggggagtccgtcgacgagttcacgcatgtg
cctctggtccgcctgccggatggcagcctctacgaacacgcgggccgcttcgacttcatc
gacaacaaggtggacgagaagaccggcacggtgctgatccgcgccgagttcgagaacccg
gatcgcctgctgttgccggggcagtttgtgaccgtggtcatcgagcgcaaggaggccatc
gatgcggtgatgattccgcaagcggcggtgctgaccgaccagggaggcgcctacgtcttg
ctggtgaacgatgaggacaaggtcgaggcgcgacggatcgagaccggccaacgcttcggg
ccgaatctggtggtcagcgagggcctgaagcccggcgagcgggtcatcctctatggcgtg
cagaaggtgcgcccggggctgacggtgaagcccgagctatcggcggcgccgagtgacccg
atggacagcgcgaccgcggaagacgaatcgggcggcgagcagaagaccccggacgagacc
caatag
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