Thiocapsa bogorovii: LT988_20250
Help
Entry
LT988_20250 CDS
T07840
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
tbog
Thiocapsa bogorovii
Pathway
tbog01501
beta-Lactam resistance
tbog01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
tbog00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LT988_20250
01503 Cationic antimicrobial peptide (CAMP) resistance
LT988_20250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tbog03036
]
LT988_20250
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tbog02000
]
LT988_20250
01504 Antimicrobial resistance genes [BR:
tbog01504
]
LT988_20250
Chromosome and associated proteins [BR:
tbog03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
LT988_20250
Transporters [BR:
tbog02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LT988_20250
Antimicrobial resistance genes [BR:
tbog01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LT988_20250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
MSMEG_3727_PQQ-assoc
Motif
Other DBs
NCBI-ProteinID:
UHD15568
LinkDB
All DBs
Position
complement(4564825..4566183)
Genome browser
AA seq
452 aa
AA seq
DB search
MTTTHSSRPCQRTGLLAGVLLATALGSPALAESAPTADKAPTPPAVVVAAVESQLVDHEG
RFIGTIQAIQQVNVQARVEGFLDQVAFDQGFMVKAGQLLYQIDQAPFQAKLDAAKAQLAS
AVADSASAKADLLDAQAQFERFAALVKKGDTSQSQFDRSRAQRDMAQANVEKAQAAELQA
QAEIQTAQINLGYTTITSPIDGRIGATNYTIGNLVGPSSKILATVVQLDPIRAVFSIPSA
DFVRIKEHAGKPGSSLQDYVPELLLPTGATYAEKGRLAFVDNQVNASTGSVAIYADFPNP
DGMLLPGQFITALIHTAEQMREPVIAAGAVIQTKNGKQVYVLDKDNRVALRTIKTSGQVG
TAFAVSAGLREGELVVVSGLQKIKPGMVVTPTRADAPAGTASDRTRDAAATTPSDAAPSG
TSAEPAPSATGAAKPNATPNDSTDRTTPQTER
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgacccattcctcccgcccctgtcagcgtaccggcttgctggccggtgtcctg
ttggccaccgcccttggctctccggccttggccgagagcgcaccgaccgcggacaaggcc
ccgaccccgccggcggtcgtcgtcgccgcggtggaatcgcaactcgtcgaccacgaaggg
cgattcatcgggaccatccaggccatccagcaggtcaatgtccaggcccgcgtggagggc
tttctggaccaggtcgcgtttgatcagggcttcatggtgaaggccgggcagctcctgtat
cagatcgatcaagcgcccttccaggccaaactggacgcggcgaaggcccaactggcctcg
gcggtggcggactcggccagtgcgaaggcagacctgctggacgcccaggcccagttcgag
cgctttgccgccttggtcaagaaaggcgatacctcccagtctcagttcgaccgctcccgg
gcacagcgcgacatggcgcaggcgaacgtggagaaggcccaagccgccgagcttcaggcg
caggccgagatccagaccgctcaaatcaatctcggctacacgaccatcaccagcccgatc
gacggacgcatcggggcgaccaactacaccatcggcaacctcgtcggaccgagcagcaag
atcctcgcgaccgtcgttcagcttgatccgatccgtgccgtcttctcgatcccgagcgcg
gacttcgtgcgcatcaaggagcacgccggcaagcccggctcgagcctccaagactacgtg
cccgagctgctgcttccgaccggcgcgacctatgccgaaaagggccggctcgccttcgtc
gacaaccaagtcaacgccagtaccggctcggtcgcgatctacgcggatttccccaacccc
gacggcatgctgctcccgggacagttcatcacggcgcttatccacaccgccgagcagatg
cgcgaaccggtgattgccgccggggcggtgatccagactaagaacgggaaacaggtctac
gtcttggacaaggacaaccgcgtcgccctgcgcaccatcaagacgagcggccaggtcgga
accgcttttgccgtcagcgccgggctgcgcgagggtgagctcgtcgtcgtctcgggcctc
cagaaaatcaagccggggatggtggtgacgccgacccgcgccgatgcgcccgcaggcacc
gcatcggacagaacacgcgacgccgcggcaacgacaccctccgacgcggctccgagcggg
acatcagcggaaccggccccgagcgcgaccggcgcggccaagccgaacgcgacgccaaac
gacagcacggatcggaccacgccgcagacggagcgctga
DBGET
integrated database retrieval system
