Trypanosoma brucei brucei: Tb927.3.1120
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Entry
Tb927.3.1120 CDS
T01013
Name
(RefSeq) GTP-binding nuclear protein rtb2, putative
KO
K07936
GTP-binding nuclear protein Ran
Organism
tbr
Trypanosoma brucei brucei
Pathway
tbr03008
Ribosome biogenesis in eukaryotes
tbr03013
Nucleocytoplasmic transport
tbr03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tbr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
Tb927.3.1120
03008 Ribosome biogenesis in eukaryotes
Tb927.3.1120
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
Tb927.3.1120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tbr03019
]
Tb927.3.1120
03009 Ribosome biogenesis [BR:
tbr03009
]
Tb927.3.1120
03016 Transfer RNA biogenesis [BR:
tbr03016
]
Tb927.3.1120
03036 Chromosome and associated proteins [BR:
tbr03036
]
Tb927.3.1120
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tbr04147
]
Tb927.3.1120
04031 GTP-binding proteins [BR:
tbr04031
]
Tb927.3.1120
Messenger RNA biogenesis [BR:
tbr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Tb927.3.1120
Ribosome biogenesis [BR:
tbr03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
Tb927.3.1120
Pre-60S particles
Tb927.3.1120
Transfer RNA biogenesis [BR:
tbr03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
Tb927.3.1120
Chromosome and associated proteins [BR:
tbr03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
Tb927.3.1120
Spindle formation proteins
Tb927.3.1120
Exosome [BR:
tbr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Tb927.3.1120
GTP-binding proteins [BR:
tbr04031
]
Small (monomeric) G-proteins
Ran Family
Ran
Tb927.3.1120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
Gtr1_RagA
G-alpha
RNA_helicase
GTP_EFTU
Pox_A32
AAA_16
AAA_22
AAA_24
AAA_7
DUF5906
TsaE
UCR_14kD
Septin
AAA_33
DUF5935
Motif
Other DBs
NCBI-GeneID:
3656049
NCBI-ProteinID:
XP_843706
UniProt:
Q57WZ3
LinkDB
All DBs
Position
3:273590..274243
Genome browser
AA seq
217 aa
AA seq
DB search
MQASSTADCVATFKLVLVGDGGTGKTTFVKRHLTGEFEKRYVATVGVDVHPLTFHTNRGK
ICFNCWDTAGQEKFGGLRDGYYIEGQCAIIMFDVTSRNTYKNVPNWHRDITRVCDNIPIV
LVGNKVDCAERQVKAKMITFHRKKGLQYYDISAKSNYNFEKPFLWLAKKLANDPNLTLVE
APMLDPNVQPLTAEQLQALQEEARAVENVVLPMGEDD
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcttcctcgacggctgactgcgttgccacattcaagcttgttcttgttggtgat
ggtggtacgggtaagacaacttttgtgaaacgtcacttaacgggtgagttcgagaagcgg
tacgtcgcgacggtcggtgttgatgtccatccgctcactttccacaccaatcgggggaag
atttgcttcaactgctgggacactgctggtcaggagaagtttggtggtctgcgtgacggc
tactatattgagggccaatgtgccatcattatgtttgatgtcacaagccgcaatacgtat
aagaatgtacccaactggcaccgtgacatcacgcgcgtgtgcgacaacattccaattgtc
ctggtaggtaacaaagtagactgtgcagagcgccaggtgaaagcgaagatgattacgttc
caccgcaagaagggacttcaatactacgatatctcggccaaatctaactacaacttcgaa
aagccgttcctgtggctcgcaaagaagcttgcgaatgatcccaacctcactcttgtggag
gcaccgatgctcgaccccaacgtgcagccgctcactgctgaacagttgcaggcacttcag
gaggaggcccgcgcagtggaaaatgttgtactgccgatgggcgaggacgactag
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