Trueperella bialowiezensis: NCTC13354_00867
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Entry
NCTC13354_00867 CDS
T05959
Symbol
pdg
Name
(GenBank) UV-endonuclease
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
tbw
Trueperella bialowiezensis
Pathway
tbw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tbw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC13354_00867 (pdg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tbw03400
]
NCTC13354_00867 (pdg)
Enzymes [BR:
tbw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NCTC13354_00867 (pdg)
DNA repair and recombination proteins [BR:
tbw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NCTC13354_00867 (pdg)
Prokaryotic type
NCTC13354_00867 (pdg)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
RecR_HhH
HHH_8
Motif
Other DBs
NCBI-ProteinID:
VEI13160
UniProt:
A0A3S4VFT0
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All DBs
Position
1:complement(929816..930442)
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AA seq
208 aa
AA seq
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MVQVEQVDGILRSLAVLYPDATTDLVHANPYELLVATILSAQTTDVRVNQVTPELFARYP
DPHALAGASREDLEKILRPLGFFRAKAKSLEGLGKALVEEHDAVVPATRDELMKLPGVGR
KTANVVLGNAFGIPAITVDTHVGRLTRRWGWTAHKDPVKAERDLMEIMPEDNWTIDCHRI
IYHGRAVCHARAPKCGACELAELCPSAS
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggtgcaggtcgagcaggtggatggcattttgcggtcgttggccgtgctttatcctgat
gcgacaaccgatcttgtgcatgcgaatccgtacgagctgctcgtggccacgatcctgtcg
gcacaaaccactgacgtgcgggtcaatcaggtgacgcccgaattgtttgctcgctatcct
gatccgcacgcgttggcgggcgcctcgcgggaggacttggagaagattttgcgtccgctg
ggatttttccgggcgaaagcaaagtccttggaaggtctaggaaaagcgttggtggaagag
cacgacgccgtcgtcccggctactcgcgacgagttaatgaagcttccgggcgtggggcgt
aagacggcgaacgtcgtattgggtaacgcgtttgggatcccggcgatcacggtagatacg
cacgtgggccgcctcacgcggcgctgggggtggacggcgcataaagatcccgtcaaagca
gaacgggatttgatggagatcatgccggaagacaactggacgatcgactgccaccggatt
atctatcacgggcgggccgtctgccatgcccgggcgcccaagtgcggcgcgtgcgagctt
gcggaactgtgcccgtcggccagctag
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