KEGG   Tribolium castaneum (red flour beetle): 656201
Entry
656201            CDS       T01046                                 
Name
(RefSeq) TAR DNA-binding protein 43
  KO
K23600  TAR DNA-binding protein 43
Organism
tca  Tribolium castaneum (red flour beetle)
Pathway
tca03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:tca00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    656201
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tca03019]
    656201
Messenger RNA biogenesis [BR:tca03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Negative regulators of mRNA 3' end processing
     656201
SSDB
Motif
Pfam: TDP-43_N RRM_1 RRM_PARP14_3 RRM_7
Other DBs
NCBI-GeneID: 656201
NCBI-ProteinID: XP_967837
UniProt: D6WYQ8
LinkDB
Position
LG8:complement(2407127..2414813)
AA seq 450 aa
MSVEYLQVAEDEGEEPIELPTEDDGTLLLSTLAAQFPGSSGLKYRNPETKAMRGVRLSEG
RLHPPPEIGWGTQIFYCVFPKENKRKSDDNLENSTAKTKRMETKLRCTDLIVLGLPWKTT
EQNLREYFETFGEVLMAQVKKDPKTGQSKGFGFIRFASYESQMRVLAQRHMIDGRWCDVK
VPNSKEGLIQQVPCKVFIGRCTEELTADDLREYFGKYGEVTDVFIPKPFRAFSFVTFLDP
EVAQSLCGEDHIIKGVSVHVSNAAPKSETRGGGYGGGGPRGANHGNNRSGPGPDGPGMYQ
QRYNPGPNQGNWSNQGPRGNIDMPNLQALGITGQGQQGSNQQSCNPLGLGLNLSALPMNP
ALVAAALNQAGWGLIGNLQNQPEPNFNQGFNNGPNNNSGNTPNGSNQGGSSNPGFLSWIN
QGGGQNQDGGQWPRPPPQQAQENKGFLKYD
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgtcggtggagtacctccaagtggccgaggacgagggcgaggagcccatcgagttgccc
accgaagatgacggaactctgcttctgagcactctggcggcacagttcccgggctcctcg
gggctcaagtacaggaatcccgagacgaaagcgatgagaggcgtgcgattgagcgagggg
cggctgcatccgccaccagagatcggctggggcacgcagattttctactgtgtttttccc
aaagaaaacaaacggaaatcggacgacaatttagaaaattcaactgcgaaaacgaaacgt
atggaaacaaaactaagatgtacagacttgatagtgttaggattaccttggaaaacaaca
gaacagaatttacgcgaatatttcgaaacgttcggtgaagttttaatggctcaagtgaag
aaagaccccaaaaccggccaatcaaaaggcttcggtttcattcgcttcgcctcgtacgaa
tcccagatgcgtgtcttggcccaaaggcatatgattgacggtcgatggtgtgatgtcaaa
gtacccaattcaaaagaaggtctgatccaacaagtgccctgcaaagtgttcatcggccgt
tgcactgaagaattaaccgccgacgatcttcgcgaatatttcggcaaatatggcgaagtc
accgatgttttcatcccgaaaccgtttcgcgcattcagttttgttacatttctggacccc
gaagtggcccaaagtctctgtggcgaggatcatataatcaagggtgtgtcagttcatgtt
tcaaacgccgcccccaaatccgaaacacgaggcggtggttatgggggcggcggaccacga
ggtgccaatcatgggaataacaggagcggaccgggacctgatgggcctgggatgtaccaa
caaaggtacaatccaggtccgaatcagggcaattggagcaatcaggggccgaggggaaat
atcgatatgcccaatttacaagctttaggtataaccggtcaaggtcagcaaggtagtaac
caacaaagctgtaatccattgggtttgggtttgaatttgagcgctttacccatgaatccc
gctctggtcgctgccgcattgaatcaagcaggctgggggcttatcggtaatttacagaat
cagcccgaaccgaatttcaatcagggcttcaacaacggccccaacaataacagcggcaac
acgccgaacggcagcaaccaggggggtagcagcaatcctggttttctcagttggataaat
cagggcggcggtcaaaaccaagatggcggccaatggcctcgaccgcccccccaacaggcg
caggagaacaagggatttctcaagtacgactaa

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