Tribolium castaneum (red flour beetle): 656201
Help
Entry
656201 CDS
T01046
Name
(RefSeq) TAR DNA-binding protein 43
KO
K23600
TAR DNA-binding protein 43
Organism
tca
Tribolium castaneum (red flour beetle)
Pathway
tca03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
656201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tca03019
]
656201
Messenger RNA biogenesis [BR:
tca03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
656201
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TDP-43_N
RRM_1
RRM_PARP14_3
RRM_7
Motif
Other DBs
NCBI-GeneID:
656201
NCBI-ProteinID:
XP_967837
UniProt:
D6WYQ8
LinkDB
All DBs
Position
LG8:complement(2407127..2414813)
Genome browser
AA seq
450 aa
AA seq
DB search
MSVEYLQVAEDEGEEPIELPTEDDGTLLLSTLAAQFPGSSGLKYRNPETKAMRGVRLSEG
RLHPPPEIGWGTQIFYCVFPKENKRKSDDNLENSTAKTKRMETKLRCTDLIVLGLPWKTT
EQNLREYFETFGEVLMAQVKKDPKTGQSKGFGFIRFASYESQMRVLAQRHMIDGRWCDVK
VPNSKEGLIQQVPCKVFIGRCTEELTADDLREYFGKYGEVTDVFIPKPFRAFSFVTFLDP
EVAQSLCGEDHIIKGVSVHVSNAAPKSETRGGGYGGGGPRGANHGNNRSGPGPDGPGMYQ
QRYNPGPNQGNWSNQGPRGNIDMPNLQALGITGQGQQGSNQQSCNPLGLGLNLSALPMNP
ALVAAALNQAGWGLIGNLQNQPEPNFNQGFNNGPNNNSGNTPNGSNQGGSSNPGFLSWIN
QGGGQNQDGGQWPRPPPQQAQENKGFLKYD
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggagtacctccaagtggccgaggacgagggcgaggagcccatcgagttgccc
accgaagatgacggaactctgcttctgagcactctggcggcacagttcccgggctcctcg
gggctcaagtacaggaatcccgagacgaaagcgatgagaggcgtgcgattgagcgagggg
cggctgcatccgccaccagagatcggctggggcacgcagattttctactgtgtttttccc
aaagaaaacaaacggaaatcggacgacaatttagaaaattcaactgcgaaaacgaaacgt
atggaaacaaaactaagatgtacagacttgatagtgttaggattaccttggaaaacaaca
gaacagaatttacgcgaatatttcgaaacgttcggtgaagttttaatggctcaagtgaag
aaagaccccaaaaccggccaatcaaaaggcttcggtttcattcgcttcgcctcgtacgaa
tcccagatgcgtgtcttggcccaaaggcatatgattgacggtcgatggtgtgatgtcaaa
gtacccaattcaaaagaaggtctgatccaacaagtgccctgcaaagtgttcatcggccgt
tgcactgaagaattaaccgccgacgatcttcgcgaatatttcggcaaatatggcgaagtc
accgatgttttcatcccgaaaccgtttcgcgcattcagttttgttacatttctggacccc
gaagtggcccaaagtctctgtggcgaggatcatataatcaagggtgtgtcagttcatgtt
tcaaacgccgcccccaaatccgaaacacgaggcggtggttatgggggcggcggaccacga
ggtgccaatcatgggaataacaggagcggaccgggacctgatgggcctgggatgtaccaa
caaaggtacaatccaggtccgaatcagggcaattggagcaatcaggggccgaggggaaat
atcgatatgcccaatttacaagctttaggtataaccggtcaaggtcagcaaggtagtaac
caacaaagctgtaatccattgggtttgggtttgaatttgagcgctttacccatgaatccc
gctctggtcgctgccgcattgaatcaagcaggctgggggcttatcggtaatttacagaat
cagcccgaaccgaatttcaatcagggcttcaacaacggccccaacaataacagcggcaac
acgccgaacggcagcaaccaggggggtagcagcaatcctggttttctcagttggataaat
cagggcggcggtcaaaaccaagatggcggccaatggcctcgaccgcccccccaacaggcg
caggagaacaagggatttctcaagtacgactaa
DBGET
integrated database retrieval system