Tribolium castaneum (red flour beetle): 661200
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Entry
661200 CDS
T01046
Name
(RefSeq) nephrin
KO
K24496
nephrin
Organism
tca
Tribolium castaneum (red flour beetle)
Pathway
tca04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
661200
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tca04990
]
661200
Domain-containing proteins not elsewhere classified [BR:
tca04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
661200
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
C2-set_2
V-set
C1-set
C2-set_3
fn3
Ig_VEGFR-1-like_5th
FN3_DSCAM-DSCAML_C
V-set_CD47
Fn3_ROS1
CD34_antigen
DUF6381
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
661200
NCBI-ProteinID:
XP_008190700
UniProt:
A0A139WLP6
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All DBs
Position
LG3:2186183..2411477
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AA seq
1317 aa
AA seq
DB search
MDYVRNIFCFMTISLSLVYGQQQYFRVQPRDVKVQEGGEAMLECEVANLAGQVQWTKDGF
ALGFSSVIPGFPRYSVIGDRRHGIYNLRVSNASLEDDAEYQCQVGPARLHKAIRANARLN
VISPPSSVEILDHRHNSKIEIKENQEFHLECRVRNAKPAAKIVWYRGNVELNIPDREDQI
IEVPGKNGDKRVTRYDTHSRISLKPTAEDDYAEYTCEARHEALSPDIPLRTTVQLSVFYP
PGPPYIEGYTEGETIRRGQTVELVCRSRGGNPPAQLIWYKNGEQIRMAYRTAGRVSENVY
TFTADASDNKARYKCEASNIMSKAPLKAEVDMTVLFSPAHVTISGPTEARVGDPVPLTCT
TANSNPPAEIKWMVAGRQVRNATSRTVVSPEGGWITTSNITAVVEPNRRSLVVICHGLNM
QLTENVVSTHTINVLYPPSAPFIHGYTQGSYIPAGTVQKISCTSSGGNPLATLTWYKNDK
KINSVLKTTDKSVTAEITILTNVTDNEARYRCEAANSATEIPLFETITMNVYFPPDHVKI
RKEPLELKPNEQATLTCDSSSSNPPAKLSWWREGIPVQGLLNTTKPGLHGGTVSSIELKL
NITEQLNGIVYTCQATNEALQRSVHDAITLQVLYKPVFDKDNEEAVTGIEGEPLIITLKA
DGNPQNIAYTWTKDGLPIIQSSSSSGIERIISDGPVLNITRLSRHDAGTYSCEALNSQGS
SVAQVNITVQYAATIVATSENVVVNPNEDATLSCTADGNPLSDDTITWKRDDFPDFDART
SVMYDKNGTSYLRITDVTRDDLGNFQCIVNNGVGNVTTKEVMLIVKHKPEIDQHPALLKF
ASDAGDTGRVVCRSQASPLAKYKWARSGAPITANTTGKYYTTYRQIDALTSESVLFITHV
TSSDYGNYECVARNELGFATASPRLEVTSAPDTPTLLTILNVTHDTVTLGWTPGFDGGMK
AAYRIRYRQVNDDGYKYVDVVPQNATSFLIRDLEVNTQYVFSIMAMNKLGNSKYMPDLLS
ARTSMYSDHIEKIIPEDLLEKQDLPRIVIISVSVIGIFLLIVNIGLVAGCMLKRRAKRIR
EQSNQTSKSATIEMYAPSSYNDTVTGETLSSVSEKSETYSNEGSNNDYVDEGRKQATSTY
LMDQQDYPGAYPVCPSYELQMQPNMAHKTHTLPHPHHHHQHHMHDRNRARDDQSLAYHGT
MSAKSSYVSAPSPAPPADGSYYNMSDRYLSYPPPLDFQNPPPIPAHPHMGHMHNPVTPPL
PANGSLLRHQRGAVPPDVLHNTSQNPQILQAQTLAQKRELTSFGNGYGVNEQEGHLV
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
atggattatgtgcgaaacatattctgcttcatgaccattagtctgagtttggtttatggc
cagcaacagtacttcagagttcagccccgggacgtcaaagtgcaggagggtggcgaagcg
atgctggaatgcgaagttgccaatctggcaggtcaagtgcaatggaccaaggacggattt
gccttagggttctcgtcggtcatcccgggtttccctcgatactctgtgatcggtgaccgt
cgtcatggcatatataacttgagggtgagcaatgcttcccttgaggacgacgccgaatac
cagtgtcaagtgggaccggcaagacttcataaggcaattcgagcaaacgccagactgaac
gtcatatcgccgccgtcgtccgtcgaaattttggaccatcggcataattccaagattgaa
ataaaggaaaatcaagagtttcatcttgaatgcagggttcggaacgccaaacccgccgcc
aaaatcgtttggtacagaggaaacgtggaactaaatatacccgatcgcgaggaccaaata
attgaggtccccggcaaaaacggcgacaaaagggtcaccagatacgacacgcactcccgt
atctctttgaagccaacagctgaggatgattacgcggaatacacgtgcgaagcgcgccac
gaagcgttatcccccgacatcccgttacgaacaaccgtacagttgagcgttttctatccg
ccgggcccgccctacatcgagggctacacggaaggcgagaccatccgccgcggccagacc
gtggagctggtgtgccgcagtcggggcggcaatcccccggcccagctcatctggtacaaa
aacggggagcagatccgcatggcctacaggacggcgggccgcgtgtccgagaacgtctac
acgttcacggccgacgccagcgacaacaaggcgcgctacaagtgcgaggcgagcaacatc
atgtccaaggcgcccctcaaagccgaagtggatatgacggtgctattttcgccggcacat
gtcaccatatcagggccgaccgaagccagggttggcgatccggtgcctctcacttgcacg
accgcaaactccaatccgcccgctgaaattaaatggatggtggccggcaggcaggttaga
aatgccacctccaggacggtcgtctccccggaaggaggctggattacaacttcgaacatc
acagccgttgttgaaccgaatcggagaagtttggtcgtgatttgtcacggactgaacatg
caattaaccgaaaatgttgtctcgacgcatactatcaacgttttatatccaccaagtgcc
ccttttatccacggctacacgcagggctcgtacatccctgccggaaccgttcaaaaaatc
tcctgcacctcatccgggggcaaccccttagccaccctaacgtggtacaagaacgacaaa
aagataaattcagtgttgaaaacgacggacaagtcagtaactgcagaaataacaattctg
acaaatgtaaccgataatgaggcgcgatatcggtgcgaagcagcaaactcagctactgaa
atcccgctcttcgaaacgataacaatgaatgtttactttccacctgatcacgtgaaaatt
cgtaaagaaccgcttgaactgaaaccgaacgagcaagcgactctaacttgcgactcgagc
tcgagcaatcctccagcgaaattatcgtggtggcgtgagggcatcccagtccaaggtctc
ctcaatacgaccaaacccgggcttcatgggggcacagtttccagtattgagctcaaactc
aacatcacggaacaactcaatgggattgtttacacgtgtcaagccacgaatgaggcgctg
caacgctcggtccatgacgccatcaccctgcaagttttatataagcccgtcttcgacaaa
gataacgaagaagcggtcacgggcatagaaggcgagccattaataatcacgttaaaagca
gacggcaatccgcagaacatcgcctacacctggacaaaggacggcctcccgattatccaa
tcgtcctcgagttcgggcatcgagaggattatctccgacggtccggttttaaatataacc
agattaagccgccacgacgctggaacctactcttgcgaagccctgaactcgcagggcagt
tcagtggcccaagttaacatcaccgtccaatacgcagcgacaatcgtcgccacgagcgaa
aatgtcgtcgtgaatcccaatgaggacgcgacgctttcctgcacagcggacgggaatccg
ctgtctgatgacacaattacgtggaaaagggacgattttccggattttgacgcgcgcacc
tccgttatgtacgataaaaacgggacgtcgtatctgcggataactgatgttacaagggac
gatttggggaactttcaatgcatcgtcaacaacggcgtgggaaatgtcaccacgaaagaa
gtgatgctcattgtcaagcataaacccgaaattgatcagcatccggctcttcttaaattt
gcaagtgatgcgggcgacaccgggagagtggtttgccggagccaggcctcgcctttggcc
aagtacaaatgggctaggtcgggggcgcccatcacggctaataccaccgggaaatactac
accacctacagacagatcgacgctcttacatcggaatccgtcctgttcatcacccatgtg
acctcctccgactacggcaactacgaatgcgttgcccgcaacgaattgggatttgcgacc
gcttctcctcgccttgaagtaacttctgctccagatactcccacactgctgacaatccta
aacgtgactcatgataccgttacgttaggatggacacctggttttgatggaggcatgaaa
gccgcttatcgcattagatacagacaagtaaacgatgatggctataagtacgtggacgtc
gtgccacagaacgccacttctttcctgatacgagatttggaagttaacacacaatacgtg
ttctccattatggcgatgaataaattaggcaacagcaagtacatgcccgatcttttatca
gcccggacgtcaatgtacagcgaccacattgagaagattatccccgaggatttgctcgag
aagcaagacttgcccagaattgttattattagtgtttctgttattggtattttccttttg
attgtcaacatcggacttgttgccggttgcatgctaaagcgacgagctaagcgaatacga
gaacaaagtaaccaaacgagcaaatcagcaaccatcgaaatgtacgcccccagcagctac
aacgacacggtcactggagagaccttatcttcggttagcgagaaaagtgagacttatagc
aacgaaggaagcaacaacgattacgtcgatgaagggcgcaagcaagcaacgagcacttat
ctaatggaccagcaggactacccaggtgcgtacccagtgtgtcccagttacgagcttcag
atgcaacctaacatggctcacaaaactcacactcttcctcatcctcatcatcaccaccag
catcacatgcatgataggaacagagctagagatgaccagagtcttgcctatcatggcacg
atgtcagcgaaatcgtcgtacgtgagcgcgccctcgccagcgcccccagccgacggttca
tactacaacatgtccgaccgctacttgtcatatccgccgccgctggacttccagaatccg
cccccgattccggcgcacccccacatggggcacatgcacaacccggtgacgccgcccctg
cccgccaacggctccctgctgcgccaccagcgaggggccgttccgcccgacgtcctgcac
aacaccagccaaaacccccaaatactccaagctcaaactctcgctcaaaagcgggagctc
accagttttggcaacggttacggtgttaacgaacaggaaggacatcttgtctga
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