Tribolium castaneum (red flour beetle): 662059
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Entry
662059 CDS
T01046
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
tca
Tribolium castaneum (red flour beetle)
Pathway
tca03018
RNA degradation
tca03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
662059
09123 Folding, sorting and degradation
03018 RNA degradation
662059
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tca03019
]
662059
03041 Spliceosome [BR:
tca03041
]
662059
Messenger RNA biogenesis [BR:
tca03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
662059
mRNA degradation factors
5'-3' decay
Lsm complex
662059
Spliceosome [BR:
tca03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
662059
Complex C
U2 snRNP components
662059
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
TIG_SUH
RimP_C
LNS2
Glutaredoxin
Motif
Other DBs
NCBI-GeneID:
662059
NCBI-ProteinID:
XP_973274
UniProt:
D6WUX0
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All DBs
Position
LG8:complement(3887335..3887983)
Genome browser
AA seq
101 aa
AA seq
DB search
MADDLENIPSITVKEPLDLVRLSLDERIYVKMRNDREIRGRLHAYDQHMNMILSDAEETI
TTVEIDEETYEEVYRTTKRNIPMLFVRGDGVILVSPPMRTS
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgacttagaaaatattccctcaatcaccgtcaaagaaccgctcgatttagtg
aggttaagtttagacgaacgtatttatgtaaaaatgcgaaacgatcgagaaatccggggc
agactccacgcttatgaccaacacatgaacatgatcctgagcgacgccgaagagaccata
accacggttgaaatcgatgaagaaacatatgaagaggtttacagaacgacgaaacgtaat
attcccatgcttttcgtccgaggtgacggcgtgatcttggtctcacccccaatgcgcact
tcgtaa
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