Trinickia caryophylli: U0034_06915
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Entry
U0034_06915 CDS
T09722
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
tcar
Trinickia caryophylli
Pathway
tcar00540
Lipopolysaccharide biosynthesis
tcar01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
U0034_06915 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
tcar01005
]
U0034_06915 (lpxC)
Enzymes [BR:
tcar01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
U0034_06915 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
tcar01005
]
Lipid A
U0034_06915 (lpxC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
WQE13117
LinkDB
All DBs
Position
1:complement(1521318..1522235)
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AA seq
305 aa
AA seq
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MLKQRTIKSIVKTIGIGLHSGRKVELTLRPAAENTGIVFSRIDLPTPVDIPASAMSIGDT
RLASVLQKDGARVSTVEHLMSACAGLGIDNLYVDVTAEEIPIMDGSAASFVFLMQSAGIL
EQNAAKKFIQVTKPVEVRDGDKAARLDPYFGFKLKFTIDFQHPAVDKTGQALEVDFATTS
YVREIARARTFGFAHEVEMMRELGLARGGSMDNAIVLDEYRILNNDGLRYDDEFVKHKML
DAIGDLYVVGHPLLASYTAYKSGHGLNNALLRELLAHEDAYEIVTFDDAQRAPRGFGYDA
QTAFA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagcaacgcaccatcaagtcgatcgtcaagaccatcggcattggcctgcactcg
gggcgcaaagtcgagttgacgcttcgccccgccgccgagaacaccggtatcgtgttctcg
cgtatcgacctgcccacgcctgtcgatatcccggcgtcagccatgtcgattggcgacacg
cgcctggcttcggtcttgcaaaaggatggcgcgcgggtctcgacggtcgagcatctgatg
tcggcgtgcgcgggtctgggcatcgacaatctgtacgtcgacgtcacggccgaggaaatc
ccgatcatggacggcagcgcggcatcgttcgtcttcttgatgcagtcggcggggatcctg
gagcaaaacgcggcgaagaagtttatccaggtcaccaagccggtcgaggtgcgcgacggc
gacaaggccgcacggctcgatccgtatttcggtttcaagctcaagttcacgatcgatttc
cagcatcccgccgtcgacaagactgggcaggctctggaggtcgattttgcgacgacgtcg
tatgtgcgggaaatcgcccgtgcacggacgttcgggttcgcgcacgaagtcgaaatgatg
cgcgagctcggcctcgcgcgcggcggcagcatggacaacgcgatcgtgctcgacgagtat
cggattctcaacaacgacgggcttcggtacgacgacgagttcgtcaagcacaagatgctc
gatgcgattggcgatctgtacgtggtgggccatccgctgctcgcctcgtacacggcctac
aagtcgggtcatggcttgaacaacgcgttgctgcgcgaattgctcgcccacgaggatgcc
tacgagatcgtgacgttcgacgatgcgcagcgtgcgccgcgcggcttcggctacgatgcg
cagacggcattcgcctga
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