KEGG   Trinickia caryophylli: U0034_23830
Entry
U0034_23830       CDS       T09722                                 
Symbol
cas5e
Name
(GenBank) type I-E CRISPR-associated protein Cas5/CasD
  KO
K19125  CRISPR system Cascade subunit CasD
Organism
tcar  Trinickia caryophylli
Brite
KEGG Orthology (KO) [BR:tcar00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:tcar02048]
    U0034_23830 (cas5e)
Prokaryotic defense system [BR:tcar02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-E factors
    U0034_23830 (cas5e)
SSDB
Motif
Pfam: Cas_Cas5d DUF5557 MobL
Other DBs
NCBI-ProteinID: WQE15554
LinkDB
Position
2:complement(1042309..1043037)
AA seq 242 aa
MREYMVFQLYGPMAGWGELAVGEQRACADHPSRSALLGMIGAALGVCRDDDAGQEVLSRG
YRFGVKLIAAGMPLRDYHTVQWPEVSKKVAYRTRRQELRDMRKLNTILTSRDYRSDSFSV
VAAEAAPDAPYSLPALAAALRAPVFVPYLGRKSCPLALPMDPRVVCFDTLKQALDSRDGD
SPLLGCGAVRRDQQTRYFWDEAMTAPGMEPMLQLIRHDQPLSRRRWQFEPRRELVYLTGS
TQ
NT seq 729 nt   +upstreamnt  +downstreamnt
atgcgcgagtatatggttttccagctatacggcccaatggctggctggggcgaactggca
gtgggcgagcagcgcgcctgcgcggaccatccatcgcgttcggccttgctgggcatgata
ggcgcggcacttggcgtgtgccgtgatgacgatgctggccaggaagttttgagccgtgga
taccgcttcggcgtcaagctgattgctgccggcatgccgctgcgcgattaccacacagtg
cagtggccggaggtatcgaagaaagtggcttatcgcacccgccgccaggagctgcgcgac
atgcgaaagctcaacaccatccttaccagccgggactatcgcagtgacagtttcagcgtg
gtggccgcggaggccgcaccggatgctccgtatagcttgcctgcgctcgcggcggcactg
cgtgcgccggtgttcgtgccttatctggggcgcaagtcttgcccgctggcgctgccgatg
gacccacgcgtcgtgtgcttcgacacgctgaagcaggcgctggatagccgcgacggcgat
tcgccgttactcggttgcggtgccgtccgccgggaccagcagacccgttatttttgggat
gaggcgatgacagccccgggcatggagcccatgttgcaactgatacggcacgaccagccg
ctatcgcgccgccgctggcagttcgagccgaggcgcgagctcgtgtatctgacggggagc
acgcaatga

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