Trinickia caryophylli: U0034_25740
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Entry
U0034_25740 CDS
T09722
Symbol
shc
Name
(GenBank) squalene--hopene cyclase
KO
K06045
squalene-hopene/tetraprenyl-beta-curcumene cyclase [EC:
5.4.99.17
4.2.1.129
]
Organism
tcar
Trinickia caryophylli
Pathway
tcar00909
Sesquiterpenoid and triterpenoid biosynthesis
tcar01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
U0034_25740 (shc)
Enzymes [BR:
tcar01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.129 squalene---hopanol cyclase
U0034_25740 (shc)
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.17 squalene---hopene cyclase
U0034_25740 (shc)
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GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
Prenyltrans
Pec_lyase
TED_complement
Motif
Other DBs
NCBI-ProteinID:
WQE14103
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Position
2:complement(1466707..1468701)
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AA seq
664 aa
AA seq
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MNDFSAAATAAPLDATKGEPLADSLETSIARATDAILAAQHPDGHWVYELEADSTIPAEY
ILLVHYLGETPNVELERKIVRYLRRIQLADGGWPLFTDGALDVSASVKAYFALKMAGEPE
NAEHMQRARRAILAAGGAEAVNVFTRILLALYGVIPWRAVPMMPVEITLLPKWFPFHLSK
VSYWARTVIVPLLVLNARRPQARNPCGVRIDELFRGTASDVGLLPRAPHQNRGWFAVFRA
VDTVLRALDRFFPKDSRNRAIGAAVAFVDERLNGEDGLGAIFPAMANAVMMYDTLGYPPD
HPHRAIARASIEKLLVVGEDEAYCQPCLSPVWDTSLAAHALLETELPRAEQAALRGLEWL
RPLQILDVRGDWVSRRPNVRPGGWAFQYANPHYPDVDDTAVVVLAMDRAAKLTGSDELYR
ETIARAREWVVGMQSSNGGWGAFEPENTHYYLNNIPFSDHGALLDPPTADVSGRCLSMLA
QLGEMPGTSEPARRAYDYMLAEQEADGSWYGRWGMNYIYGTWTALSALNAAGIAHDDARV
QRAAQWLISIQNPDGGWGEDGASYKLDYRGYERAPSTASQTSWALIGLMAAGVVDHPSVG
RGIAYLMRTQREHGLWDETRFTATGFPRVFYLRYHGYRKFFPLWALARYRNLKRDKRVRV
SVGL
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacttttccgcagccgctaccgcggcgccgctcgatgcgacgaagggtgagccg
ctcgccgattcgctcgagacctcgatcgcccgcgcgaccgatgcgattctcgcggcgcag
catccggacggccattgggtctacgaactcgaggcggattcgacgattcccgccgaatac
atcctgctcgtgcattacctcggcgaaacgccgaacgtcgagctcgagcgcaagatcgtc
cgatacctgcgccgcattcagctcgccgatggcggctggccgctcttcaccgacggcgcg
ctcgacgtcagcgcgagcgtgaaggcctacttcgccctgaaaatggcgggcgaacccgaa
aacgccgagcacatgcagcgcgcgcgccgcgcgatcctggcggcgggcggagcggaagcc
gtcaacgtattcacgcggattctgctcgcgctctatggtgtgattccgtggcgtgcggta
ccgatgatgccggtcgaaatcacgctgctgccgaagtggtttccgtttcatctctcgaag
gtatcgtactgggcgcgcacggtgatcgtgccgttgctcgtgctcaacgcgcggcggccg
caagcgcgcaatccgtgtggcgtgcgtatcgacgaactctttcgcggaactgcgtccgac
gtcgggcttctgccgcgcgcgccgcatcagaaccgcggatggttcgccgtgttccgtgca
gtggatacggtcctgcgcgcgctcgaccgcttctttccgaaggattcgcgcaatcgggcc
atcggggcggccgtggcgttcgtcgacgaacggctgaacggcgaggacggcctcggcgcg
attttcccggcaatggccaatgccgtgatgatgtacgacacgctcggctacccgcccgac
catcctcatcgtgccatcgcgcgtgcctcgatcgagaaactgctggtggtgggcgaggac
gaggcttattgccagccctgcctttcgccggtatgggacacctcgctcgctgcgcatgcg
ctgctcgaaaccgagctgccgcgcgccgagcaggccgccttgcgcggcctcgaatggctg
cggccgctgcagatcctcgacgtacgcggcgactgggtctcgcgacgcccgaatgtgcgg
cccggcggctgggcgttccagtacgcgaacccgcactacccggatgtggacgacacggct
gtcgtggtactggccatggatcgggccgcgaagctgaccggctcggatgagctctaccgc
gaaacgattgcccgcgcgcgcgagtgggtggtcggcatgcagagcagtaatggcgggtgg
ggcgcgttcgagcccgagaacacgcattactacctgaacaacatcccgttttccgatcat
ggcgcgttgctcgatccgccgacggccgacgtatcgggccgctgcctgtcgatgctcgcg
caactgggcgaaatgccgggcacgagcgagcctgcgcgacgtgcgtacgattacatgctc
gccgagcaggaagccgatggcagttggtacggccgctggggcatgaactacatctacggc
acctggacggcgctgagtgcgctcaacgcggcgggcatcgcgcacgatgacgcaagggtc
cagcgggccgcgcagtggctcatatcgattcagaacccggatggcggctggggcgaggat
ggcgcgagctacaagctcgactatcgcggctacgagcgcgcgccgagtaccgcgtcgcag
acctcatgggcgctcattggcctcatggcggcaggcgtcgtggatcacccgtcggtcggg
cgcggcatcgcttatctgatgcgtacgcagcgcgagcacgggctgtgggacgagacgcga
ttcacggcaacgggatttccgcgtgtcttctacctgcgctaccacggctaccgcaagttc
ttcccgctctgggcactggcgcgctatcgcaatctcaagcgcgacaagcgcgtgcgtgta
tcggtcgggctgtga
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