Trinickia caryophylli: U0034_28690
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Entry
U0034_28690 CDS
T09722
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
tcar
Trinickia caryophylli
Pathway
tcar01501
beta-Lactam resistance
tcar01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
U0034_28690
01503 Cationic antimicrobial peptide (CAMP) resistance
U0034_28690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tcar03036
]
U0034_28690
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcar02000
]
U0034_28690
01504 Antimicrobial resistance genes [BR:
tcar01504
]
U0034_28690
Chromosome and associated proteins [BR:
tcar03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
U0034_28690
Transporters [BR:
tcar02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
U0034_28690
Antimicrobial resistance genes [BR:
tcar01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
U0034_28690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
OEP
BMFP
PsbX
Motif
Other DBs
NCBI-ProteinID:
WQE14636
LinkDB
All DBs
Position
2:2157499..2158773
Genome browser
AA seq
424 aa
AA seq
DB search
MATGVALLEMKNNWRTAKAATLLALLSLGACKEHGEPAGQTSARAQVSVVVLRAQSVPLS
TELPGRVVASLEAEVRPQVTGIIKQRFFREGSDVREGEALYQIDPMTYQAAYDSALAALQ
KAESAVPAAQAKADRYSALVKRNAVSQQEYDDAQDVLAQARASVRAAGANVEAAKIALDY
TTIRAPISGRIDKSSLTAGALVTAGQATALTTIRQIDPINVDLTQSSMSFLDMREALEAG
RLRSAGGGVEVKLKLENGTTYPLGGRLEFSESNVSPATGTFVLRAVLRNPARLLLPGMYV
RAVVDEGTIPRAFLVPQRAVSRDLRGEATALVVREGKVVQLALGGARQYGNDWLVDKAVL
DGDQVIVEGGQRVREGDAVVTRRVEIDTATGAIRPAAPLAGVRDAGAPASGRPLLSRDRQ
PNRG
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggctacgggagtcgctttgttggagatgaagaacaactggagaacggcgaaggctgca
acgctgctcgcgttgctgtcgcttggcgcgtgcaaggagcacggcgagccggccgggcag
acgagcgcgcgcgcgcaggtcagcgttgtcgtactgcgcgcccagtcggtgccgctttcc
accgaactgccgggacgcgtggtggcctcgctggaagcggaggtacgcccccaggtcacc
ggcatcatcaagcagcggttttttcgcgaaggcagcgatgtccgggagggcgaggccctc
taccagatcgacccgatgacttatcaggcggcgtacgacagcgcgcttgccgcgttacaa
aaggcggagtccgccgtgccggcggcgcaggcaaaggccgatcgatacagcgcgctggtg
aagcgcaatgccgtcagtcagcaggagtacgacgatgcccaggacgttcttgcccaggcc
cgtgccagtgtgcgagcggcgggggcaaacgtcgaggcggcgaagatcgcgctcgactat
acgacgattcgggcgccgatctcgggccgcatcgacaagtcgtcgctcacggccggggcg
ctcgtcacggccggtcaggccacggccttgaccacgatccgccagatcgatccgatcaac
gtcgatctgacgcagtcgagcatgagctttctggatatgcgcgaggcgctcgaagcgggg
cgcttgcgatccgcgggcgggggcgtggaggtgaagctcaagctcgagaacggcacgacc
tatccgcttggcgggcgactggagttctccgaatcgaacgtgagtccggcgacgggtacc
ttcgtgttgcgggccgtcctgcgcaatcccgcccgcctcctgcttccgggcatgtatgtg
cgggccgtcgtcgatgaagggacgatcccgcgcgcatttctggtacctcagcgcgccgtg
agccgggaccttcgcggcgaggcgacggcgctcgtcgtacgagaggggaaagtcgttcaa
ctggcgctgggcggtgcgcggcagtacggcaacgactggctcgtcgataaggccgtatta
gatggcgatcaggtgatcgtcgaaggcggccagcgcgtgcgcgagggcgacgccgtcgtc
acgcggcgggtcgagatcgataccgcgacgggcgcgatccgtccggcagctccgctagcc
ggggtccgcgacgcgggcgcacctgcttccggccgtcccctgctgagccgagatcggcag
cccaatcgcggttga
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