Theobroma cacao (cacao): 18588272
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Entry
18588272 CDS
T02994
Name
(RefSeq) RING-box protein 1a
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03420
Nucleotide excision repair
tcc04120
Ubiquitin mediated proteolysis
tcc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
18588272
04120 Ubiquitin mediated proteolysis
18588272
09124 Replication and repair
03420 Nucleotide excision repair
18588272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tcc04121
]
18588272
03400 DNA repair and recombination proteins [BR:
tcc03400
]
18588272
Enzymes [BR:
tcc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
18588272
Ubiquitin system [BR:
tcc04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
18588272
Multi subunit type E3
SCF complex
Ring finger protein
18588272
Cul2 complex
18588272
Cul3 complex
18588272
Cul4 complex
18588272
Cul7 complex
18588272
Cul8 complex
18588272
Cul9 complex
18588272
DNA repair and recombination proteins [BR:
tcc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
18588272
TCR (transcription coupled repair) factors
Cul4-CSA complex
18588272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
DUF8003
Motif
Other DBs
NCBI-GeneID:
18588272
NCBI-ProteinID:
XP_017981977
UniProt:
A0AB32WQR3
A0A061GK71
LinkDB
All DBs
Position
9:complement(3932282..3934599)
Genome browser
AA seq
118 aa
AA seq
DB search
MATLDSDVPMVPVGEASSSTAPSSSTKKPKRFEIKKWSAVALWAWDIVVDNCAICRNHIM
DLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atggctactctagactccgatgttccgatggttccagttggcgaggcttccagcagcacc
gccccttcctcctccactaagaagcccaagcgcttcgagatcaaaaagtggagtgccgtt
gcgctctgggcctgggatattgtcgtggataattgtgcaatttgcaggaatcacatcatg
gatctatgtatcgaatgtcaagccaaccaagccagcgccaccagtgaggaatgcactgtt
gcttggggggtctgcaaccatgcatttcacttccactgcatcagccgatggctcaagact
cggcaagtgtgtccactggataacagtgagtgggagttccaaaagtatggtcactag
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