KEGG   Theobroma cacao (cacao): 18588272
Entry
18588272          CDS       T02994                                 
Name
(RefSeq) RING-box protein 1a
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
tcc  Theobroma cacao (cacao)
Pathway
tcc03420  Nucleotide excision repair
tcc04120  Ubiquitin mediated proteolysis
tcc04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:tcc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    18588272
   04120 Ubiquitin mediated proteolysis
    18588272
  09124 Replication and repair
   03420 Nucleotide excision repair
    18588272
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tcc04121]
    18588272
   03400 DNA repair and recombination proteins [BR:tcc03400]
    18588272
Enzymes [BR:tcc01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     18588272
Ubiquitin system [BR:tcc04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   18588272
  Multi subunit type E3
   SCF complex
    Ring finger protein
     18588272
   Cul2 complex
     18588272
   Cul3 complex
     18588272
   Cul4 complex
     18588272
   Cul7 complex
     18588272
   Cul8 complex
     18588272
   Cul9 complex
     18588272
DNA repair and recombination proteins [BR:tcc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      18588272
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      18588272
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 DUF8003
Other DBs
NCBI-GeneID: 18588272
NCBI-ProteinID: XP_017981977
UniProt: A0AB32WQR3 A0A061GK71
LinkDB
Position
9:complement(3932282..3934599)
AA seq 118 aa
MATLDSDVPMVPVGEASSSTAPSSSTKKPKRFEIKKWSAVALWAWDIVVDNCAICRNHIM
DLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq 357 nt   +upstreamnt  +downstreamnt
atggctactctagactccgatgttccgatggttccagttggcgaggcttccagcagcacc
gccccttcctcctccactaagaagcccaagcgcttcgagatcaaaaagtggagtgccgtt
gcgctctgggcctgggatattgtcgtggataattgtgcaatttgcaggaatcacatcatg
gatctatgtatcgaatgtcaagccaaccaagccagcgccaccagtgaggaatgcactgtt
gcttggggggtctgcaaccatgcatttcacttccactgcatcagccgatggctcaagact
cggcaagtgtgtccactggataacagtgagtgggagttccaaaagtatggtcactag

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