Theobroma cacao (cacao): 18613115
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Entry
18613115 CDS
T02994
Name
(RefSeq) ABC transporter I family member 21
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
18613115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcc03019
]
18613115
Messenger RNA biogenesis [BR:
tcc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
18613115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
ORC-CDC6-like
nSTAND3
AAA_15
AAA_28
SMC_N
NACHT
AAA_23
AAA
AAA_5
AAA_22
AAA_25
AAA_30
AAA_18
SRP54
Zeta_toxin
PduV-EutP
AAA_33
AAA_24
Arf
AAA_16
Motif
Other DBs
NCBI-GeneID:
18613115
NCBI-ProteinID:
XP_017981909
UniProt:
A0AB32WVZ0
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Position
1:complement(26945486..26947949)
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AA seq
299 aa
AA seq
DB search
MAEQACCKSREEEGNGESKGIRVCGMQFAYELQPPLFVDFDVDIAPGSRCLLVGANGSGK
TTLLKILAGKHMVGGRDVVRVLNRSAFHDTQLVCSGDLAYLGGSWSKTIGSAGEVPLQGD
FSAEHMIFGVEGIDPVRRGKLIELLDIDLQWRMHKVSDGQRRRVQICMGLLHPFQVLLLD
EVTVDLDVVARMDLLDFFKEECEQRGATIVYATHIFDGLETWATHLAYIQDGELKRSEKL
TEVNELKSSENLLSVVEAWLRSETKCEKKKPIKTPAQVQKASPFGISPFMSSRHMAYYR
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcaagcttgttgcaaatcaagagaagaagaagggaatggagaatcgaaaggc
atcagagtatgtggcatgcaattcgcatacgaattacagcctccgctgttcgtcgatttc
gatgtcgacatcgctcctggatcgcgttgccttctcgtgggcgccaacggatctgggaag
acgacattgttgaaaattttagctggaaagcatatggttggtggaagagatgttgtgaga
gtgctaaaccgttcggctttccatgacactcaacttgtttgtagtggcgatttagcttat
ttgggtggatcttggagtaaaactattggctctgctggggaggttccattgcagggggac
ttctctgcagaacacatgatatttggagttgaagggattgatcctgtgaggagaggaaaa
ttgattgagctgcttgatattgatttgcaatggcgaatgcataaggtatctgacgggcaa
cggcgacgagtccaaatttgtatgggtcttcttcatcctttccaggttcttttgctagat
gaggttacggtggaccttgatgttgttgcgaggatggatctacttgatttctttaaggag
gaatgtgagcagagaggagccacaattgtatatgcaacccatatctttgatgggttggag
acatgggcaacacatctggcttacatccaagatggtgaattgaagagatctgagaagttg
acagaagttaatgagttgaaaagttcggaaaatttgctttctgttgttgaggcctggctt
cgctctgaaaccaagtgtgagaaaaagaaacccatcaaaacccctgcccaagtccagaag
gcctcgccctttggtatttctcctttcatgtcatccaggcacatggcatactatcgttga
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