Tigriopus californicus (tidepool copepod): 131877461
Help
Entry
131877461 CDS
T09700
Name
(RefSeq) F-box/WD repeat-containing protein 7-like
KO
K10260
F-box and WD-40 domain protein 7
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
131877461
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcf04131
]
131877461
04121 Ubiquitin system [BR:
tcf04121
]
131877461
Membrane trafficking [BR:
tcf04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
131877461
Ubiquitin system [BR:
tcf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
131877461
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_C
Beta-prop_SCAP
WDR55
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_EML_2
F-box-like
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_DCAF12
Beta-prop_Nup120_160
Beta-prop_IFT122_1st
F-box
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_RIG_1st
Beta-prop_IFT140_2nd
PQQ_2
Beta-prop_VPS8
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_NWD2_C
AsnC_trans_reg
Motif
Other DBs
NCBI-GeneID:
131877461
NCBI-ProteinID:
XP_059079119
LinkDB
All DBs
Position
3:complement(3573322..3580882)
Genome browser
AA seq
724 aa
AA seq
DB search
MEDRLQVVDRWECGSGDERDPPSTSGSQPDPTSPPAGAGPSVASAPSESASTSQLVASPE
NIDAIVQDHDTFGTDENEDSLDSMSTSMDDLMTQSTADSSFAQQQSRGGPEGPSAAASSS
SSSSSLSRTLSVVETAETLSEVIELESCHPIKRKSSRSGYEGPDDETQEGLSRIKKQCVA
RESHPALDDEETMPGNEDSCPTGASEPRSIALVEITSYPAGPNERSKLIPDKANPPSEIL
NWVDTFGGWSHAERLLAIDQLISACQPTQVRHMLAVIEPQFQRDFIFLLPKELSLYVLSF
LSPRDLLRAAQTCRYWRILCEDNLLWREKFREAGLMDHDFKETMRARARRASSTVYNFPY
SPWKSSFMRQHKIEMNWRVRPVRQPKVLKGHDDHVITCLQFSDNRIVSGSDDNTLKVWSA
VNGKCLRTLVGHTGGVWSSQMEGGTIVSGSTDRTLKVWNAETGACVHTLYGHTSTVRCMH
LHKNRVVSGSRDATLRIWDIQTSECLHVLTGHVAAVRCVQYNGRLVVSGAYDYLVKVWNP
DTEECLHTLSGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGACKHALMGHQSLTSGME
LRNNILVSGNADSTVKVWDITSGQCLQTLSGPNKHQSAVTCLQFNSKFVITSSDDGTVKL
WDVKTGDFIRDLVALESGGSGGVVWRIRANSTKLVCAVGSRNGTEETKLMVLDFEANEAN
AIKQ
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggaggatcgcctgcaggtggttgaccgatgggagtgtggcagtggcgatgaacgcgac
cctccttccacttccggcagccagcccgatcccacctccccccccgccggagccggtccc
tcggtagccagcgcgccctccgagtcggcctccacctctcagttggtggcctcgcccgag
aatatcgatgccattgtccaagatcatgatacatttggaacggacgagaacgaagactcc
ctggactccatgtccacctccatggatgacctcatgacccaatcgacggccgattcctca
ttcgctcaacaacaatcgcggggtgggccggagggcccatccgctgccgcctcctcctcc
tcctcctcgtcctcgctctcgcgtaccttgtctgtggtggagaccgccgagaccctgtca
gaagtgatcgagctcgagagctgtcatcccatcaagcgcaaatcttcgcgatccgggtac
gaagggcctgatgatgagactcaggaaggtctgtctcggatcaagaaacagtgtgtcgct
cgagaatctcacccggctctggatgacgaagagaccatgccgggaaacgaggacagttgt
cccacgggcgcttctgaaccgcgctccattgccttggttgagattacatcctatccggct
ggtccgaatgagcggagcaaactcattcccgacaaggccaacccacccagcgagatattg
aattgggtggacacgtttggcgggtggtctcacgctgaacgacttctagctattgatcag
ctcataagtgcgtgccaacccacccaagttcgacacatgttggccgtgatcgagccccag
ttccaacgagatttcattttccttcttccgaaagagttgtccttgtatgttttgtccttc
ctctcgccgcgtgaccttttacgggcagctcaaacctgccggtattggcggattctgtgc
gaggacaacctcctttggcgggagaaattccgcgaagccggcctcatggaccatgatttc
aaagagacgatgcgagctcgagccaggcgagctagttccaccgtatacaatttcccctac
tctccatggaagtcgagtttcatgcggcaacataaaatagaaatgaattggcgggtgcgc
ccagtgaggcagccgaaggtgctcaaaggccacgatgaccatgtgataacgtgtcttcaa
ttcagcgacaatcgcattgtctcaggttctgatgacaacactttaaaggtgtggtcggct
gtgaacggaaagtgtctcagaacattggtgggacatacgggtggggtttggtcctcacaa
atggaaggaggcactatcgtgagtggaagcacggatcgaacgctcaaagtctggaacgct
gagaccggcgcttgtgtccataccctctacggacatacctccaccgtcagatgcatgcac
ctacataaaaatcgagtggtctccggatcccgcgatgcgacgctccgaatctgggacatc
cagacgagcgagtgtctccacgtgctcacagggcacgtggctgctgtgagatgtgttcag
tacaatggtcgattggtggtatctggggcctacgactacctcgtcaaggtgtggaaccct
gacactgaggagtgtctgcacactctctccggacacaccaatcgggtgtactcgctgcaa
ttcgatgggatccacgtggtctccggttcactggacacgtcgattcgcgtgtgggacgtg
gagacgggagcgtgcaaacacgccctaatgggtcatcaatctctcacatcaggcatggag
ctcaggaataatatcctggtgtcggggaatgcggattccaccgtcaaggtctgggatatt
acctcgggccaatgtttgcagacgctgtcaggtcccaacaagcaccaatcagctgtcact
tgccttcaatttaactcaaagtttgtcatcacctcttcggatgacgggactgtgaagctc
tgggacgtaaagactggagacttcatcagggacctagtggctttagagagcggtggaagt
ggcggcgtggtttggcggatccgcgccaattccaccaagttggtgtgtgctgttggttcg
cgcaatgggacggaagagacgaaactgatggtcttggactttgaggccaatgaggctaat
gctatcaagcaataa
DBGET
integrated database retrieval system
