Tigriopus californicus (tidepool copepod): 131877528
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Entry
131877528 CDS
T09700
Name
(RefSeq) sodium channel protein para-like
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tcf04040
]
131877528
Ion channels [BR:
tcf04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
131877528
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
GPHH
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
131877528
NCBI-ProteinID:
XP_059079205
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Position
3:complement(8838647..8848923)
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AA seq
1618 aa
AA seq
DB search
MGTFHFNGSVISYVLSSFFKGNDLPRRYGEFPLELANLPICDIDPYYRDTRTFMVVSKGG
AIYRFSAGNALFFLSPFHPIRRIALLVLTHPMFSFFIICTILVNCFVMVQEDSEELASVE
IIFTAIYTYESAIKLFARGLVMDKFTYLRDAWNWLDFIVIAMSYVTIAIDLGSFSALRTF
RVFRAMKSVAVIPGLKTIVSAIMYSVKNLRDVIVLTIFVLAVFALLGLQIYMGVLSQICV
KDFFTDSEFVNKTGNIDLDYELWTNNASNWFASPSTGQLVMCGNSSGAGNCPDGFTCLKG
GPNPNYGYTSFDNFGSAYLCAFRLMTQDYWENLYQITLRTAGPWNIFFFMVNIFLGSFYL
INLILAIVAMSYDELQRQAEEEARKEMEELEAIQCAEEAAMTEAEAAAAEAVANLSLLDF
GGGSLGSGEFNHGFEGDSFHEQDAVVLKDVVNQMSITSSMKSLSVYMDDNDEEEEGPNCK
EAFKTNLEYVISILCIWDCGIVWIKMSEILAIIVFDPFMELFIILCIVVNVLFMTLDHYN
IDYHHNGGMSPFFTSLLNNGNYFFTAIFAIESFAKLGAMSPRYFFTDGWNIFDFVIVILS
FVELLAEGISGLSMLRSFRLLRVFKLAKSWKSLNDILSIMANTFGALSYLTFVLGIIIFI
FAVMGMQLFGSYYVTKVCNPKWNCVMPRWNFTDFMHSIMIVFRVLCGEWIESMWDCMFVA
GVTCVPYFLATVLVANLVILNLFLALLLSSFSDMGGGEKAEDQEKDKIQIAFDRIGWFFT
CQMCRSPKGKDKEDEPPPPETPSDLDGMSKKDSIIGNGIDLSYSKGALSTAYEEAPGYDK
FSETIDYSPADEILVEDCCPQIVYKIFPCCHGNPEEPFWQVWSKHRLMGSQLIENKYFEG
IVLVLILVSSFVMTLEDIWFDTKPLLIDTLYYLDRILTGVFFIETSLKLFSMGFIKYFGN
AWCWLDFVIVAVSLINFGASLLGAGNIPIFKTMRTLRALRPLRAMAKLEGMKVVVNALIG
ALPSIFNVLLVCLIFWLIFAIIGVNFFMGRFYKCIDPNTGVRFSHEVIPNMTMCNSSITG
FPAEWVNSRVTFDNVGMAYLALLQVATWKGWIDIMNDAIDSVDRGKQPHREVNIYMYIYF
VLFIVLGSFFTLNLLVGVIIDKFNEQKNKGGSSLDAFMTEDQRKYIAAMKKASTKKPLKA
LPRPFWKPQAIVFGIVTNKKFDMIIMGFIALNMVAMMCDHYDQSPNWTFVLDNMNMFFIV
VFTTEMLLKLFALRHHYFSEPWNLFDFVVVLLSLAGLFLSDLIAKYFVSPTLLRVVRVAK
IGRVLRLIKGARGIRTLLFSLVMAFPALINIALLLFLVMFIFSVFGMSLFKNVKITTGFD
DVHNFQTFTKTFTLLFQICTSAGWAEAWLAISNEKNCTEPDPETGSSGNCGSNIAAVIFM
ILYLVLTFLIIVNMYIAVILENYSQASEDVQEGITDEDYELFYEVWREFDPEGTQYMPFK
NLSEFLDVLEPPLQIRKPNKFKIVQMDIPIVRFINPETGQTREDCVFCADILDILTQDFF
ARKGNKIEESPHVEHVKVTTFADRPGYERVSSSVWKQRESYCASLIQRSFKYHASLQS
NT seq
4857 nt
NT seq
+upstream
nt +downstream
nt
atgggcacatttcatttcaacgggtcagttattagttatgtcttgtcttctttctttaaa
gggaatgacttgcctcgtcgatatggcgagttccctttggagcttgccaacctacccata
tgtgatattgacccctactacagggatacacggaccttcatggtcgtgtccaagggtggt
gccatctaccgattctcggctgggaacgctctcttcttcctctcgccctttcatcccatt
cggagaattgctctcttggtcctcactcatcccatgttctctttcttcatcatatgcacc
atcctggtcaattgcttcgtcatggtccaagaggattctgaggaattagcgtccgtggag
atcatcttcaccgccatttacacttatgagtccgccatcaagctatttgcacgtggattg
gtcatggataagttcacttaccttcgagatgcttggaattggctggacttcattgtgatc
gccatgtcctatgtgaccattgccattgacttgggaagcttctcggccctcaggactttc
cgggtgtttcgagccatgaagtccgtggctgttatccctggcttgaaaaccattgtcagt
gccatcatgtactccgtaaagaacctgcgggatgtgattgtgctcaccatcttcgttctg
gccgtgtttgccttgcttggattacaaatctatatgggcgttttgtcgcagatctgtgtc
aaggatttcttcaccgacagtgagttcgtcaacaaaacggggaacattgatcttgactat
gagctatggaccaacaatgcatccaattggtttgcctcaccctcgacgggtcaattggtg
atgtgcggcaactcgtcaggagccggaaattgtcccgatggattcacttgtcttaagggt
ggacccaatcccaactatggttacacgagctttgataattttggatcagcatatctttgt
gcattccgattgatgacccaagattattgggagaacctctaccaaatcaccctcagaaca
gcggggccctggaatatctttttcttcatggttaacattttcctagggtcattttacctg
atcaacttgatcttggctattgttgccatgtcttatgacgaacttcaacgtcaagctgaa
gaagaggcgagaaaggaaatggaagagctagaagctattcagtgcgctgaggaagccgct
atgactgaagccgaggccgctgcagctgaggcagtggcgaatctttctttgttagacttt
ggaggaggaagccttggcagtggcgaattcaatcatggcttcgaaggagactcctttcat
gaacaggacgcggtggttttgaaggacgtggtgaatcagatgtctatcacttcatcaatg
aaaagtttatccgtttacatggatgacaatgacgaggaggaggaagggcccaattgcaaa
gaggctttcaaaactaaccttgaatatgtgatatcaattctgtgcatttgggattgtggg
atcgtgtggatcaaaatgagcgaaattctagccatcattgttttcgaccctttcatggag
ttgttcattatcctgtgtattgtggttaatgtcctcttcatgacattggatcactacaac
atagactaccatcacaatggaggcatgtcgccatttttcacgtcgttattgaacaatggg
aattacttcttcacggcgattttcgctattgaatctttcgccaaactaggggctatgagt
ccaagatacttcttcactgatggttggaatatttttgactttgtgatcgtcatcctttcc
tttgtggaacttttggcggagggaatttcgggtctgtccatgttgcgatctttccgactc
ctccgagtgttcaaattggccaaatcatggaagtctttgaatgatatcttgagcatcatg
gccaacacctttggggcactctcttatctaaccttcgtcttgggaatcatcatcttcata
tttgctgtgatgggaatgcaactctttgggtcgtattacgtcaccaaagtttgtaatccc
aagtggaattgtgtcatgcccagatggaactttacggactttatgcacagtatcatgatt
gtctttcgagtattgtgtggagaatggatcgagtccatgtgggactgcatgtttgtggct
ggagtgacctgcgttccatacttcttggctaccgttttagtggccaatttggttattctg
aatctctttctggctttgctactcagtagcttctctgatatgggaggtggagaaaaagct
gaagatcaagaaaaagacaagatccaaattgctttcgaccgaatcggatggttcttcact
tgtcaaatgtgtagatcaccgaaaggaaaagacaaagaggatgagccacccccaccagag
actccaagtgatttggatggaatgtcaaagaaggactcgataattggtaatggaattgac
ctcagctactcaaagggtgccctctccacagcttacgaggaagctcccgggtacgataaa
tttagcgagaccatcgactacagtccggccgacgagatcctggtggaagattgttgccct
caaattgtctacaagatcttcccatgttgccatggaaatccagaggaaccgttttggcaa
gtctggtccaaacatcggctcatgggctcacagttgattgaaaacaagtatttcgagggc
attgtcctcgtgctcattttggtgagcagctttgtcatgaccctcgaggacatttggttt
gacaccaagcctcttctcattgacaccctctactacctggatcgaattttgacgggtgtg
ttcttcatcgaaacatccttgaagctcttttccatgggattcatcaagtacttcggcaac
gcctggtgttggttggactttgtgattgttgcagtgtccctgatcaactttggagccagc
cttttgggagccggcaacattcccatcttcaaaaccatgcgaactttgcgagccctccgt
cccctgagagccatggctaaattagaagggatgaaagtggttgtgaatgccttgatcgga
gctctaccgagcatattcaatgtgctattggtttgtctgatcttttggttgatattcgcc
atcatcggtgtgaacttcttcatgggccggttttacaaatgcattgaccccaacacgggt
gtgcgatttagccacgaggtcattccaaatatgaccatgtgtaattcgtctatcacggga
tttcccgcagaatgggtcaattctagagtgacctttgacaacgtggggatggcttactta
gccttacttcaggtggccacgtggaaaggttggatcgacatcatgaacgatgccattgat
tctgtggatcgtggcaagcagcctcatcgcgaggtcaacatctatatgtatatctacttt
gtgttgtttattgttttgggcagttttttcacattgaatctcttggtgggtgtgatcatt
gacaaattcaatgagcaaaagaacaagggcgggtcctcactggatgctttcatgactgag
gatcaaaggaaatacatcgcagccatgaaaaaggcttccaccaagaagccgttaaaagcc
ttgcccagacctttttggaagccccaagccattgtatttggcatcgtcaccaacaagaag
tttgacatgattatcatggggtttatagccctgaatatggttgcgatgatgtgcgatcat
tatgatcaaagtcctaattggacgtttgtcctggataacatgaacatgtttttcatcgtg
gtttttacgactgaaatgctgttaaagctgtttgcacttcgccatcattacttctcggag
ccgtggaatttgttcgactttgtcgtggtccttctgtccttggcgggccttttcctcagc
gatctcattgcgaaatattttgtatccccaactttgctcagagtggtccgggtggccaaa
attggccgggttctgcgtctcatcaaaggggccagagggattcgaaccctgctcttctct
ctcgtgatggcatttcccgccctcattaacattgctttactcctctttttggtcatgttc
attttttctgtgttcgggatgtcccttttcaagaatgtaaaaataaccaccggattcgac
gacgtccacaacttccaaactttcaccaaaactttcacgcttctttttcaaatttgcaca
tcagcgggttgggccgaggcttggttggccataagtaatgagaaaaactgcaccgaacct
gatccagaaaccgggagctctggcaattgtggaagtaatatcgctgcggtcatcttcatg
atcttgtacctagttctgaccttcctgatcatcgtcaatatgtacattgctgtcatcctc
gagaactattcacaggctagcgaggacgtccaagaaggaatcacagatgaggattacgag
cttttctacgaagtgtggcgcgagtttgaccctgaaggaacccagtatatgccttttaag
aatttatccgagtttttggatgtgcttgagcctccgcttcagatcagaaagcccaacaag
ttcaagattgtgcaaatggatatccctatcgtcagatttattaaccccgagacgggtcaa
acgcgcgaagattgtgttttttgtgcggatatcctggatattctcacgcaagactttttc
gctcggaagggcaacaaaatcgaggaatccccgcacgttgagcatgtcaaggtgaccaca
ttcgcggatcgtccgggttatgaacgagtctcttcatccgtttggaaacaacgagagagt
tattgcgcctcactcattcagcgatccttcaagtatcacgcttctttgcagtcgtga
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