Tigriopus californicus (tidepool copepod): 131878244
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Entry
131878244 CDS
T09700
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic-like
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
131878244
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tcf01007
]
131878244
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tcf03016
]
131878244
Enzymes [BR:
tcf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
131878244
Amino acid related enzymes [BR:
tcf01007
]
Aminoacyl-tRNA synthetase
Class I (U)
131878244
Transfer RNA biogenesis [BR:
tcf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
131878244
Prokaryotic type
Other AARSs
131878244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
DUF5915
Anticodon_1
Ubiquitin_IARS1
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
131878244
NCBI-ProteinID:
XP_059080152
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All DBs
Position
1:complement(7043728..7051102)
Genome browser
AA seq
1271 aa
AA seq
DB search
MPGGQESAWVPSTAIDFAAEEVRILELWQNLRAFETCLKQSQDRPRFTFYDGPPFATGLP
HFGHILAGTIKDIIPRWMHQQGFHVERRFGWDTHGLPVEYEIDKTLNIKGPADVAKMGIE
KYNNECRKIVMRYASEWESTVTRLGRWIDFKNDYKTLYPWFMESVWWVFKQLWDKDLIYK
GFRVMPYSTGCCTPLANFEATQNYKEVQDPSVIVHFPLDEDPTVSFVAWTTTPWTLPSNM
ALCVNPKSTYVKVQDLKRNKTFIMMESRLSYVLGAKGAKYKVLESFKGASLKDKKYKPIF
DYFSQYKSTEPGQGAFRVMVDTYVNEGSGTGIVHQAPFFGEDDNRVCLAGGIVEKGGDVI
CPLDAMGKFTKPVTDFLGMYVKDADKEIIKKLKEDDRLINVSQVSHSYPFCWRSDTPLLY
KAIPSWFMRVEQMQDLLLERNADTYWVPESIKEGRFANWLRDARDWNLSRNRYWGTPIPV
WMSEDGEESVCIGSIDELAQLSGVKVEDLHRETVDKITIPSSRPGQPPLKRITEVFDCWF
ESGAMPYAQAHYPFENKKQFEDSFPADFIAEGTDQTRGWFYTLLVLSTALFNKAPFKNLI
VNGLVLASDGQKMSKRLKNYPDPNEIMDKYGADALRLFLINSPVVKAESLKFKEEGVQYI
LKDVFLPWYNAYRFLLQNIDTYQRETGQTFQWSESTYGNSENVMDKWIISFTQSLLVFVK
KEMAAYHLYTVLPKLMKFIENLTNWYVRTNRRRLKGEGNSTEDCLTALETLFSVVFTMVR
VFAPFTPFLTENMYQRLRKFAQGFDTDDLASVHYVMIPRPRLDLINEDIERSVARMQTVI
ELGRVVRDRKVMPIKYPLPELVLIHKDQQCLDDVKSFETYVLEELNIKQLTLSTDKQQYG
VELRAEPNHKTLGLRFKGAFKEVMKEIKALNDEKISDFLKTDKIQILGHDLEPEDLRIMY
TFAGDQALSEKYEAHSDNDVLVLLDCTPDQSMLDEGLAREVNNRIQKLRKAAKLVPSDQV
TVYYELQPADHNLQNVINTFQEYIENTTKSPIRPIAQRSTSESQITHETFSVKDATLNLT
ITKGFPNKSSVVALNSNGNEITLIDHGMPKSPFVNVVFQGRVGVVFLENPIGCNKLASVN
ALENEVKAIFGVHGPEIELYLDHSGVAETLSTLPKSGSTLFAKTKFGTLSKLVSKVDGSC
CPFINVENGKSKAVGTLLLENPSSESVAEYAHESVKAIFSLKVHSNLYNDSQKKKVVTDL
RAVSSNSTIYV
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atgccgggtggccaagagagcgcgtgggtgccatccactgccatcgattttgcggccgag
gaagtccgtattctggagctgtggcaaaatctgcgagcctttgaaacgtgtctaaagcaa
agccaagatcgacctcgcttcaccttctacgacggaccgccctttgccacgggtttgccc
cactttgggcacattctagccggcactattaaggacatcatccccagatggatgcatcaa
caaggattccacgtggaacgccgtttcggttgggacacgcacggattacccgttgagtat
gagattgacaagacactcaacattaaaggaccagccgatgtggccaagatgggcattgaa
aagtacaacaatgaatgtcgcaagatcgtcatgagatatgcgtccgagtgggaaagcact
gtgactcggcttggtcggtggattgactttaagaatgattataaaacgttgtatccgtgg
ttcatggaatcggtttggtgggtgtttaagcaactctgggacaaagatctcatttataaa
ggattccgcgtcatgccgtattccactggctgttgcactccgttggctaattttgaagcc
acgcagaactacaaggaggtccaagatccatccgtgattgtgcacttccctctggacgaa
gaccccacagtctctttcgtggcctggacgaccacgccttggaccttgccaagtaacatg
gctttgtgcgttaatccgaaatccacttacgtcaaagtgcaggatctgaagagaaacaaa
acgttcattatgatggaatcacgattgtcctacgtcttaggcgccaagggtgctaaatac
aaagtgctagaaagcttcaagggtgcgtcgctaaaggataagaaatacaagcccatcttt
gactacttctcccaatacaagtcgactgagcctggtcaaggagccttccgagtcatggta
gacacctacgttaatgaagggtctggaacaggaatcgttcatcaggctccgtttttcggt
gaagatgataatcgtgtgtgtttggccggaggaatcgttgaaaaaggcggcgacgtgatt
tgtccacttgatgccatgggcaagttcacgaagcccgtcaccgactttcttggcatgtat
gtcaaagatgcggacaaagagatcatcaagaagctgaaggaggacgatcgcttgatcaat
gtctcgcaagtttcccatagttatccattttgctggcgatctgacacgcctcttctttac
aaagccataccttcctggttcatgcgagtggaacaaatgcaagacttactgttggagcgg
aatgccgacacttattgggttcctgaatcgattaaggagggtcgatttgccaattggctt
cgagacgctcgtgattggaatttgtcgaggaatcggtattggggcacaccaattcctgtg
tggatgtccgaggatggcgaagagtccgtttgtataggttcaattgacgagttggcccaa
ttgagtggagtgaaagtcgaggatctacatcgagaaactgtcgacaagattacaattccc
tcgtcacgaccaggccaacctccattgaagagaatcacggaagtgttcgattgttggttc
gaatcgggtgcaatgccttacgctcaagcccattacccatttgagaacaagaaacagttt
gaggattctttccccgctgattttattgccgagggcactgatcaaacgcgtggttggttt
tatactcttctcgttttgtccacggctttgttcaataaggctccattcaagaatctaatt
gtcaacggactagttttggcttcggacggacaaaagatgagcaaaaggttgaaaaactat
cctgatcccaatgaaatcatggacaagtacggagctgacgctctccggttatttctcatc
aatagccctgtggttaaggccgaatctttgaagttcaaggaggaaggtgtccaatacatc
ctgaaagacgtgttcctgccctggtacaacgcctatcgtttcttgcttcagaacattgac
acttatcaaagagagactggacaaactttccaatggtctgaaagtacttacggaaactct
gaaaatgtcatggacaaatggattattagtttcacgcaatcgctcttggtgtttgtaaag
aaagaaatggcggcctaccatttgtacactgtcctacccaagctcatgaaattcattgaa
aacttaaccaactggtatgtgcggaccaatcgaaggcgtctgaagggcgaaggtaattcc
actgaagattgtttgactgccttggagacgctgttttcggtggtgttcacgatggtgcga
gtattcgctcccttcacgccattcctcaccgaaaacatgtaccagcgtttgcggaagttt
gcccaagggttcgacacagacgatttagcatcagttcattatgtgatgatccctcgtcct
cggcttgatctgattaatgaagacattgaaagatccgtcgctagaatgcagaccgtcatc
gagttgggaagagtggtcagggatcgaaaggtcatgcccatcaagtaccctctcccagaa
ttggtactcatccacaaggatcaacaatgcctggatgacgttaagtcgtttgagacttat
gtactggaggagctcaacatcaagcaattgacactctcgacggacaaacaacaatatggg
gtggagctccgtgccgaacccaatcataagaccttagggttgcgtttcaaaggagccttc
aaagaagtgatgaaagagatcaaggctctcaatgacgaaaaaatttcagacttcctcaag
accgacaagatccaaatcttaggccatgatttagagcctgaggatcttcgaatcatgtac
acctttgccggagatcaggccttgtccgagaagtatgaggcccactcggataatgatgtc
ctcgttttattggattgcacacctgatcaatcaatgttggatgaaggcctggctcgagaa
gtgaataatcgcattcaaaaattgcgcaaggcagccaaattggttccgagtgatcaggtc
acggtctactacgaactccaaccggctgatcacaacttgcagaatgtgatcaataccttc
caagaatatatcgagaacacgaccaagtctccgatccgtcccattgctcaacgaagcact
tctgaaagccagataacccatgaaactttctccgttaaagatgcaaccttgaacttgacc
atcaccaaggggtttccgaacaaatcgtctgttgttgccctcaattccaatggaaacgag
attacattgattgaccatgggatgcccaaatccccgtttgtgaatgtcgttttccaaggc
cgtgtgggcgttgtctttttggagaacccaatcggatgcaataagttggcctcggtcaat
gcgctcgaaaatgaagtcaaggccatttttggggtgcatgggccagaaattgaactctat
cttgaccatagtggggttgccgaaactctatcaacgctccctaaaagtggatccacatta
ttcgctaaaaccaaattcggaactctatccaaattggtttccaaagttgatgggtcttgt
tgtccattcataaatgtggaaaacggtaaatccaaggctgttggtactctattgttggaa
aatccttcatcagaaagtgtagctgagtacgcccacgaaagtgtgaaggcaattttttct
ctcaaagtccactccaatttgtacaacgactctcagaagaaaaaggtcgtcacggatttg
agggctgtttcgagcaattctaccatctatgtttaa
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