Tigriopus californicus (tidepool copepod): 131878734
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Entry
131878734 CDS
T09700
Name
(RefSeq) isoleucine--tRNA ligase, mitochondrial-like
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
131878734
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tcf01007
]
131878734
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tcf03016
]
131878734
Enzymes [BR:
tcf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
131878734
Amino acid related enzymes [BR:
tcf01007
]
Aminoacyl-tRNA synthetase
Class I (U)
131878734
Transfer RNA biogenesis [BR:
tcf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
131878734
Prokaryotic type
Other AARSs
131878734
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
tRNA-synt_1g
Anticodon_1
tRNA-synt_1_2
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
131878734
NCBI-ProteinID:
XP_059080823
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All DBs
Position
4:460177..463499
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AA seq
992 aa
AA seq
DB search
MALCPSTSTESVNINTTQAWHVFQHHFHFDPSANLIKMLTALIHRPLFQWKDVRHTLITP
AIRALSHQKPPKYSSTVLLPRTNFPARLEGAKRLAQDQSIVNSTAFQSLYARQWTDWPPE
NTFILHDGPPYANGTLHMGHVVNKVLKDITNRWQLTKGRRVHYRPGWDCHGLPIELKAKR
KTGTPDRPSPLEIRNEARKFAQDTVEAQQSQFQSWGILGDWDHPYLTMDPDYVEREMRLC
HRLIQNGLMFQRYMPVYWSPSSQTALAESELEYNPNHKSISAYIKFPLCSESCRQLSIDS
GSLLIWTTTPWSIVANRAVCVKSDAEYCLIQIADEFLIVGQAALANNPDLKTCLGDHQVI
KVVSGQSLTHLKYSHPIKSVQGSEVEFPVLSANHVTMTAGTGLVHTAPAHGPDDYLVGLE
HGLDLSCPVDENGCYIRDIGPELRELSVLGDGNTKIVDLLQASGHLLSHGDFFHSYPCDW
RTKQPVILRASKQWFIDTTSLKSSSLSALKFVDIQPASWVQGFQGVLEKRPYWCVSRQRV
WGVPIPVFYHKESQEVLSNDEIIQRCCELNRSEGTDFWWKMSAKDILMGTGVNGDDYEKG
GDILDVWFDSGITWSTLPEVPADLYLEGLDQFSGWFYSSLVTGMALQKQCPYKNIFVHGF
TVDEQGRKMSKSTGNVVDPSDLITGTKKKSPYGVDTVRLWVAAHASQSSSIEIGDSIMDL
TKQTMNKIRNSCKFILGNTSRLTSREQLSSYEDLRPVDRLALLQLAVYWEHVSIHFEQMK
FNLVCLRLDHYLANDLSSFYFHITKDRLYCDEEASLRRRSAQTVLFHILETLKASFAPIA
PILAQEIENAHPVLRPSFGSRIVPENTWKDEKLESSFRFLFDLKSKLTKELGDSNLKNCD
VLAVTKTPHRLPEDMDAQDLAEFLQVPKVSICDQLNYGSMNAKGDDIMVENEMLTLRASH
TEGCFCPRCRLKTAMRDNELCQRCESVIRSLQ
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atggctttgtgccctagtacatctaccgagagtgtcaacatcaacaccacccaagcatgg
catgtgttccaacatcatttccattttgatccatccgcaaacctgatcaaaatgttgacg
gctctcattcatcgaccgttgttccagtggaaggatgtgcgacacaccttgatcacccca
gccatccgagccttgagccatcagaagccccccaaatatagctccactgttttactgcct
cgaaccaatttcccagctcgtttagagggagccaaacgcttggctcaagaccagtccatt
gtgaactcgaccgcgttccaatcgctgtatgctcgccaatggaccgattggcctccagag
aacaccttcatcctccatgatggacctccttacgccaatggaacgcttcacatgggacac
gtggtcaacaaagtcctcaaagatatcaccaatcggtggcaattgaccaaaggtcggcga
gtgcattaccgaccaggttgggattgccacggtctgcccattgaattaaaggccaagaga
aaaacgggaacacccgatcgtccatccccgttggaaattcgaaatgaggcccggaaattt
gctcaagacacggtggaagctcagcagtctcagtttcaatcatggggcattttgggcgat
tgggatcatccttatctgaccatggatccggactatgtggagcgagaaatgcgattgtgt
caccgacttattcaaaacggactcatgttccagcgttatatgccggtttattggtcgcca
tcctcacaaacggcgttggccgagtccgaattggaatacaaccccaatcacaagagtatt
tcggcctatatcaagtttcctctctgttcagagagctgtagacaattgtccattgacagt
ggatcacttttgatctggaccaccacgccttggagtattgtggccaatcgtgcggtgtgt
gtcaaatctgatgccgaatattgtctcattcagatcgcagacgagtttctcatcgttgga
caagcggcattggcgaataatccggatctcaaaacttgtttgggagaccaccaagtcatc
aaggtagtctcgggccaaagtttgacgcatttgaaatacagtcatccaataaagtctgtt
caaggttctgaggtagaattccccgtcctgagtgccaatcacgtcacaatgaccgcaggt
acgggtcttgtacacacggctccggctcacggaccggatgactacttggttggtttggaa
catggacttgatttgagttgtcccgtggatgaaaatgggtgttacatccgagatattgga
cccgagctgagggaattgtctgttttgggtgatggcaatacgaagatagtggatcttcta
caagcgtccggacatctcttgagtcacggtgacttcttccactcctacccatgcgattgg
cgcaccaagcagcctgtgatcctccgagcctccaagcaatggtttatcgacaccaccagc
ctgaaaagttcgtcattgagtgctctaaaattcgtagacatccaaccagcttcttgggtt
caaggatttcaaggcgtcctcgagaaacgcccatattggtgtgtgtcaagacaaagagtg
tggggtgtgcccatccccgtgttttaccacaaggagtctcaagaagtgttgtccaacgac
gaaatcatccagcgttgttgtgaactgaatcgatctgaggggaccgatttttggtggaaa
atgagtgccaaggacatcttaatgggaactggagtaaatggggacgactacgaaaaaggt
ggtgacattctggacgtttggtttgatagtggtatcacttggagcactctgcccgaagtt
cccgcagatctctatttggaaggcttggatcaattctccggttggttctattcgtctttg
gtcacgggaatggccttgcaaaagcaatgtccgtacaagaatatttttgtccatggtttc
actgttgatgagcagggtcgaaaaatgtccaaatccacgggcaatgttgtggacccgagt
gatttgattacgggcaccaagaagaaaagtccttatggggtggatacagtgaggctgtgg
gtggcagctcacgctagtcaatcaagttcaatcgaaattggcgactccatcatggatttg
accaaacaaaccatgaacaagatcagaaactcgtgcaaattcatcctgggtaatactagt
cgtttgacctccagagagcaactttcgtcatatgaagatctacgcccagtagatagatta
gcgttattacagctagccgtctattgggagcacgtttcaattcactttgagcaaatgaaa
ttcaatttggtctgtctcaggttagaccactatttggccaatgacctctcttctttttac
tttcacatcaccaaagatcggctctattgtgacgaagaagcctcccttcgtcgtcgatcc
gcgcaaaccgttctctttcatatcttggagaccctgaaggcgagctttgcccctattgcc
cctattttggcgcaagaaatcgaaaacgcccatccagttttgaggcccagttttggatca
cgtatcgttccggaaaacacgtggaaagacgaaaagttagaatcctccttccggtttctc
tttgatctcaaatccaagttaactaaggagttgggcgattcgaatctcaaaaattgcgat
gttctagccgtaacgaagacacctcatcgtcttccagaggatatggatgctcaagatttg
gcggaatttcttcaagtcccgaaggtatcgatctgtgatcaacttaactatggttcaatg
aatgcaaagggtgacgatatcatggtagaaaatgagatgttgactttgcgagcaagtcac
actgagggatgcttctgtccccgatgtcgtttgaaaactgccatgagggacaatgagtta
tgtcaacgatgtgagtcagtaatacgatctcttcaataa
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